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This page was generated on 2025-12-19 15:55 -0500 (Fri, 19 Dec 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.3 LTS)x86_64R Under development (unstable) (2025-10-28 r88973) -- "Unsuffered Consequences" 926
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Package 56/230HostnameOS / ArchINSTALLBUILDCHECK
clusterProfiler 4.19.2  (landing page)
Guangchuang Yu
Snapshot Date: 2025-12-19 12:00 -0500 (Fri, 19 Dec 2025)
git_url: https://git.bioconductor.org/packages/clusterProfiler
git_branch: devel
git_last_commit: fffb636
git_last_commit_date: 2025-11-19 22:22:51 -0500 (Wed, 19 Nov 2025)
teran2Linux (Ubuntu 24.04.3 LTS) / x86_64  ERROR    ERROR  skipped

BUILD results for clusterProfiler on teran2

To the developers/maintainers of the clusterProfiler package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: clusterProfiler
Version: 4.19.2
Command: /home/rapidbuild/bbs-3.23-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data clusterProfiler
StartedAt: 2025-12-19 12:38:40 -0500 (Fri, 19 Dec 2025)
EndedAt: 2025-12-19 12:38:44 -0500 (Fri, 19 Dec 2025)
EllapsedTime: 4.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/rapidbuild/bbs-3.23-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data clusterProfiler
###
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* checking for file ‘clusterProfiler/DESCRIPTION’ ... OK
* preparing ‘clusterProfiler’:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
      -----------------------------------
* installing *source* package ‘clusterProfiler’ ...
** this is package ‘clusterProfiler’ version ‘4.19.2’
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Error: object ‘load_OrgDb’ is not exported by 'namespace:GOSemSim'
Execution halted
ERROR: lazy loading failed for package ‘clusterProfiler’
* removing ‘/tmp/RtmpwqXqX0/Rinst17a73714acc0f5/clusterProfiler’
      -----------------------------------
ERROR: package installation failed