| Back to Rapid builds (Linux only) of a subset of BioC 3.23 Report updated every 6 hours |
This page was generated on 2025-12-19 15:55 -0500 (Fri, 19 Dec 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| teran2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2025-10-28 r88973) -- "Unsuffered Consequences" | 926 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 34/230 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | |||||||
| BiocParallel 1.45.0 (landing page) Jiefei Wang
| teran2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | ERROR | skipped | |||||||
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To the developers/maintainers of the BiocParallel package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: BiocParallel |
| Version: 1.45.0 |
| Command: /home/rapidbuild/bbs-3.23-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data BiocParallel |
| StartedAt: 2025-12-19 12:34:33 -0500 (Fri, 19 Dec 2025) |
| EndedAt: 2025-12-19 12:35:52 -0500 (Fri, 19 Dec 2025) |
| EllapsedTime: 78.7 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/rapidbuild/bbs-3.23-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data BiocParallel ### ############################################################################## ############################################################################## * checking for file ‘BiocParallel/DESCRIPTION’ ... OK * preparing ‘BiocParallel’: * checking DESCRIPTION meta-information ... OK * cleaning src * running ‘cleanup’ * installing the package (it is needed to build vignettes) * creating vignettes ... ERROR --- re-building ‘BiocParallel_BatchtoolsParam.Rmd’ using rmarkdown Warning in close.connection(con) : Problem closing connection: No space left on device Warning in close.connection(con) : Problem closing connection: No space left on device Warning in close.connection(con) : Problem closing connection: No space left on device Warning in close.connection(con) : Problem closing connection: No space left on device Warning in close.connection(con) : Problem closing connection: No space left on device Error: processing vignette 'BiocParallel_BatchtoolsParam.Rmd' failed with diagnostics: Error writing to connection: No space left on device --- failed re-building ‘BiocParallel_BatchtoolsParam.Rmd’ --- re-building ‘Errors_Logs_And_Debugging.Rmd’ using rmarkdown Warning in close.connection(con) : Problem closing connection: No space left on device Warning in close.connection(con) : Problem closing connection: No space left on device Warning in close.connection(con) : Problem closing connection: No space left on device Warning in close.connection(con) : Problem closing connection: No space left on device Warning in close.connection(con) : Problem closing connection: No space left on device Warning in close.connection(con) : Problem closing connection: No space left on device --- finished re-building ‘Errors_Logs_And_Debugging.Rmd’ --- re-building ‘Introduction_To_BiocParallel.Rmd’ using rmarkdown --- finished re-building ‘Introduction_To_BiocParallel.Rmd’ --- re-building ‘Random_Numbers.Rmd’ using rmarkdown --- finished re-building ‘Random_Numbers.Rmd’ SUMMARY: processing the following file failed: ‘BiocParallel_BatchtoolsParam.Rmd’ Error: Vignette re-building failed. Execution halted