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ABCDEFGHIJK[L]MNOPQRSTUVWXYZ

This page was generated on 2025-11-13 11:32 -0500 (Thu, 13 Nov 2025).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson3macOS 13.7.7 Venturaarm64R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences" 4013
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1146/2325HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
lumi 2.63.0  (landing page)
Lei Huang
Snapshot Date: 2025-11-12 13:40 -0500 (Wed, 12 Nov 2025)
git_url: https://git.bioconductor.org/packages/lumi
git_branch: devel
git_last_commit: 692966d
git_last_commit_date: 2025-10-29 09:58:49 -0500 (Wed, 29 Oct 2025)
kjohnson3macOS 13.7.7 Ventura / arm64  ERROR    OK    ERROR    ERROR  

BUILD BIN results for lumi on kjohnson3

To the developers/maintainers of the lumi package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/lumi.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: lumi
Version: 2.63.0
Command: rm -rf lumi.buildbin-libdir && mkdir lumi.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh lumi_2.63.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R lumi.buildbin-libdir
StartedAt: 2025-11-12 21:01:33 -0500 (Wed, 12 Nov 2025)
EndedAt: 2025-11-12 21:01:34 -0500 (Wed, 12 Nov 2025)
EllapsedTime: 1.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf lumi.buildbin-libdir && mkdir lumi.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh lumi_2.63.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R lumi.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=lumi.buildbin-libdir lumi_2.63.0.tar.gz'
>>>>>>> 

ERROR: dependency ‘methylumi’ is not available for package ‘lumi’
Perhaps try a variation of:
install.packages('methylumi')
* removing ‘/Users/biocbuild/bbs-3.23-bioc/meat/lumi.buildbin-libdir/lumi’