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This page was generated on 2025-11-13 11:32 -0500 (Thu, 13 Nov 2025).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson3macOS 13.7.7 Venturaarm64R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences" 4013
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Package 1998/2325HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SingleCellAlleleExperiment 1.7.0  (landing page)
Jonas Schuck
Snapshot Date: 2025-11-12 13:40 -0500 (Wed, 12 Nov 2025)
git_url: https://git.bioconductor.org/packages/SingleCellAlleleExperiment
git_branch: devel
git_last_commit: 51ef84b
git_last_commit_date: 2025-10-29 11:30:07 -0500 (Wed, 29 Oct 2025)
kjohnson3macOS 13.7.7 Ventura / arm64  OK    ERROR  skippedskipped

BUILD results for SingleCellAlleleExperiment on kjohnson3

To the developers/maintainers of the SingleCellAlleleExperiment package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SingleCellAlleleExperiment.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: SingleCellAlleleExperiment
Version: 1.7.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data SingleCellAlleleExperiment
StartedAt: 2025-11-12 17:14:08 -0500 (Wed, 12 Nov 2025)
EndedAt: 2025-11-12 17:14:23 -0500 (Wed, 12 Nov 2025)
EllapsedTime: 15.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data SingleCellAlleleExperiment
###
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* checking for file ‘SingleCellAlleleExperiment/DESCRIPTION’ ... OK
* preparing ‘SingleCellAlleleExperiment’:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
* creating vignettes ... ERROR
--- re-building ‘scae_intro.Rmd’ using rmarkdown

Quitting from scae_intro.Rmd:137-148 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `library()`:
! there is no package called 'scran'
---
Backtrace:
    ▆
 1. └─base::library(scran)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'scae_intro.Rmd' failed with diagnostics:
there is no package called 'scran'
--- failed re-building ‘scae_intro.Rmd’

SUMMARY: processing the following file failed:
  ‘scae_intro.Rmd’

Error: Vignette re-building failed.
Execution halted