| Back to Multiple platform build/check report for BioC 3.23: simplified long |
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This page was generated on 2026-03-10 11:33 -0400 (Tue, 10 Mar 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2026-03-05 r89546) -- "Unsuffered Consequences" | 4522 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | R Under development (unstable) (2026-03-01 r89506) -- "Unsuffered Consequences" | 2847 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 336/2360 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| ChemmineOB 1.49.1 (landing page) Thomas Girke
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | ERROR | ERROR | skipped | |||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | ERROR | ERROR | skipped | skipped | |||||||||
| See other builds for ChemmineOB in R Universe. | ||||||||||||||
|
To the developers/maintainers of the ChemmineOB package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ChemmineOB.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: ChemmineOB |
| Version: 1.49.1 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data ChemmineOB |
| StartedAt: 2026-03-09 15:23:39 -0400 (Mon, 09 Mar 2026) |
| EndedAt: 2026-03-09 15:23:41 -0400 (Mon, 09 Mar 2026) |
| EllapsedTime: 2.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data ChemmineOB
###
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* checking for file ‘ChemmineOB/DESCRIPTION’ ... OK
* preparing ‘ChemmineOB’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* running ‘cleanup’
* installing the package (it is needed to build vignettes)
-----------------------------------
* installing *source* package ‘ChemmineOB’ ...
** this is package ‘ChemmineOB’ version ‘1.49.1’
** using staged installation
checking for pkg-config... /opt/homebrew/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for OPENBABEL... no
checking for OPENBABEL... no
checking for gcc... clang -arch arm64 -std=gnu23
checking whether the C compiler works... no
configure: error: in `/private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmpnXFHG3/Rbuildfc8b145429e0/ChemmineOB':
configure: error: C compiler cannot create executables
See `config.log' for more details
ERROR: configuration failed for package ‘ChemmineOB’
* removing ‘/private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmpnXFHG3/Rinstfc8b21893b8d/ChemmineOB’
-----------------------------------
ERROR: package installation failed