Britta Velten
| Snapshot Date: 2026-03-18 13:45 -0400 (Wed, 18 Mar 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_22 |
| git_last_commit: 76fc31b |
| git_last_commit_date: 2025-10-29 10:49:21 -0400 (Wed, 29 Oct 2025) |
| Back to Build/check report for BioC 3.22: simplified long |
|
This page was generated on 2026-03-19 11:57 -0400 (Thu, 19 Mar 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" | 4892 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 922/2361 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.26.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.26.0 |
| Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.26.0.tar.gz |
| StartedAt: 2026-03-19 00:18:08 -0400 (Thu, 19 Mar 2026) |
| EndedAt: 2026-03-19 00:19:39 -0400 (Thu, 19 Mar 2026) |
| EllapsedTime: 91.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.26.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.2 (2025-10-31)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.26.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... INFO
installed size is 6.1Mb
sub-directories of 1Mb or more:
libs 6.0Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.26.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.22-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.22-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.22-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.22-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-873.536
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-578.686
ELB improved by 294.85
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-521.217
ELB improved by 57.4686
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.691
ELB improved by 34.5259
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-472.473
ELB improved by 14.2183
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.365
ELB improved by 6.10765
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.438
ELB improved by 3.92711
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.169
ELB improved by 3.2692
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.219
ELB improved by 2.94936
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.563
ELB improved by 2.65621
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.271
ELB improved by 2.29272
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.403
ELB improved by 1.86794
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.963
ELB improved by 1.4399
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.898
ELB improved by 1.06464
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.125
ELB improved by 0.772668
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.56
ELB improved by 0.565762
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.133
ELB improved by 0.42688
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.798
ELB improved by 0.335018
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.524
ELB improved by 0.273537
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.293
ELB improved by 0.231439
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.091
ELB improved by 0.202008
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.909
ELB improved by 0.18124
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.743
ELB improved by 0.166665
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.586
ELB improved by 0.156524
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.437
ELB improved by 0.149204
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.294
ELB improved by 0.142963
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.158
ELB improved by 0.136074
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.031
ELB improved by 0.127332
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.914
ELB improved by 0.116519
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.81
ELB improved by 0.104347
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.718
ELB improved by 0.0919509
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.638
ELB improved by 0.0803445
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.567
ELB improved by 0.0701426
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.506
ELB improved by 0.0615459
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.451
ELB improved by 0.0544623
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.403
ELB improved by 0.0486565
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.359
ELB improved by 0.0438627
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.319
ELB improved by 0.0398466
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.283
ELB improved by 0.0364244
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.249
ELB improved by 0.0334612
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.218
ELB improved by 0.0308603
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.19
ELB improved by 0.0285524
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.163
ELB improved by 0.0264873
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.139
ELB improved by 0.0246273
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.116
ELB improved by 0.0229433
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.094
ELB improved by 0.0214125
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.074
ELB improved by 0.0200163
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.056
ELB improved by 0.0187392
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.038
ELB improved by 0.0175681
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.021
ELB improved by 0.0164921
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.006
ELB improved by 0.0155013
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.991
ELB improved by 0.0145877
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.978
ELB improved by 0.0137437
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.965
ELB improved by 0.012963
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.952
ELB improved by 0.0122398
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.941
ELB improved by 0.0115692
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.93
ELB improved by 0.0109464
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.92
ELB improved by 0.0103676
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.91
ELB improved by 0.00982905
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-896.579
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-597.676
ELB improved by 298.903
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-536.891
ELB improved by 60.7845
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-491.293
ELB improved by 45.5979
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.781
ELB improved by 24.5125
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.293
ELB improved by 11.488
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.743
ELB improved by 6.5504
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.119
ELB improved by 5.62389
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.095
ELB improved by 6.02384
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.12
ELB improved by 6.97476
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.221
ELB improved by 7.89876
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.301
ELB improved by 7.92069
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.498
ELB improved by 6.80297
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.293
ELB improved by 5.20519
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.72
ELB improved by 3.57246
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.349
ELB improved by 2.37152
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.687
ELB improved by 1.66167
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.412
ELB improved by 1.27444
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.344
ELB improved by 1.06814
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.389
ELB improved by 0.955299
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.501
ELB improved by 0.887494
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.661
ELB improved by 0.840118
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.859
ELB improved by 0.802317
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.088
ELB improved by 0.770807
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.342
ELB improved by 0.745995
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.613
ELB improved by 0.729559
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.89
ELB improved by 0.723024
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.163
ELB improved by 0.726931
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.423
ELB improved by 0.740184
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.663
ELB improved by 0.759313
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.885
ELB improved by 0.777801
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.099
ELB improved by 0.786064
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.326
ELB improved by 0.772997
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.597
ELB improved by 0.729692
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.942
ELB improved by 0.654423
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.387
ELB improved by 0.555506
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.938
ELB improved by 0.448432
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.59
ELB improved by 0.348497
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.325
ELB improved by 0.264828
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.125
ELB improved by 0.199565
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.975
ELB improved by 0.150575
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.861
ELB improved by 0.114349
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.773
ELB improved by 0.0876029
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.705
ELB improved by 0.0677661
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.652
ELB improved by 0.0529572
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.61
ELB improved by 0.0418252
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.577
ELB improved by 0.0333992
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.55
ELB improved by 0.0269769
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.528
ELB improved by 0.0220471
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.51
ELB improved by 0.0182354
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.494
ELB improved by 0.0152664
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.482
ELB improved by 0.0129361
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.47
ELB improved by 0.0110931
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.461
ELB improved by 0.00962409
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-866.22
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-571.121
ELB improved by 295.099
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-508.866
ELB improved by 62.255
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.282
ELB improved by 38.5839
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.075
ELB improved by 16.2074
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.773
ELB improved by 6.3019
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.498
ELB improved by 3.27476
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.083
ELB improved by 2.41504
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.964
ELB improved by 2.11937
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.948
ELB improved by 2.01612
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.944
ELB improved by 2.00339
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.907
ELB improved by 2.03794
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.819
ELB improved by 2.08754
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.706
ELB improved by 2.11291
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.639
ELB improved by 2.06674
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.729
ELB improved by 1.91018
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.088
ELB improved by 1.64079
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.78
ELB improved by 1.30798
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.793
ELB improved by 0.987042
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.064
ELB improved by 0.729422
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.52
ELB improved by 0.543697
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.105
ELB improved by 0.41488
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.779
ELB improved by 0.325883
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.515
ELB improved by 0.264196
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.294
ELB improved by 0.221012
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.104
ELB improved by 0.190037
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.937
ELB improved by 0.166957
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.788
ELB improved by 0.148987
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.654
ELB improved by 0.134415
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.532
ELB improved by 0.122211
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.42
ELB improved by 0.111766
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.317
ELB improved by 0.102723
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.222
ELB improved by 0.0948656
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.134
ELB improved by 0.0880603
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.052
ELB improved by 0.0822172
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.975
ELB improved by 0.0772683
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.902
ELB improved by 0.0731519
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.832
ELB improved by 0.0697985
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.765
ELB improved by 0.0671145
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.7
ELB improved by 0.0649623
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.637
ELB improved by 0.063144
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.575
ELB improved by 0.0614046
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.516
ELB improved by 0.0594713
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.459
ELB improved by 0.057131
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.404
ELB improved by 0.0543087
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.353
ELB improved by 0.0510897
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.306
ELB improved by 0.0476654
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.261
ELB improved by 0.0442436
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.22
ELB improved by 0.0409825
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.182
ELB improved by 0.0379724
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.147
ELB improved by 0.0352488
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.114
ELB improved by 0.0328134
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.084
ELB improved by 0.0306511
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.055
ELB improved by 0.028741
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.028
ELB improved by 0.0270618
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.002
ELB improved by 0.0255953
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.978
ELB improved by 0.0243276
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.955
ELB improved by 0.0232504
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.932
ELB improved by 0.0223624
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.911
ELB improved by 0.0216699
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.889
ELB improved by 0.0211888
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.868
ELB improved by 0.0209466
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.847
ELB improved by 0.0209851
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.826
ELB improved by 0.0213622
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.804
ELB improved by 0.0221502
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.781
ELB improved by 0.0234256
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.755
ELB improved by 0.0252386
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.728
ELB improved by 0.0275526
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.698
ELB improved by 0.0301539
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.665
ELB improved by 0.0325857
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.631
ELB improved by 0.0342225
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.596
ELB improved by 0.0345642
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.563
ELB improved by 0.033585
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.531
ELB improved by 0.0317843
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.501
ELB improved by 0.0298662
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.473
ELB improved by 0.028388
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.445
ELB improved by 0.0276599
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.417
ELB improved by 0.0278413
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.388
ELB improved by 0.0290674
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.357
ELB improved by 0.0315161
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.321
ELB improved by 0.0353771
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.28
ELB improved by 0.0406669
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.234
ELB improved by 0.0468364
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.181
ELB improved by 0.0523863
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.126
ELB improved by 0.0552699
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.071
ELB improved by 0.0545246
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.02
ELB improved by 0.0514008
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.972
ELB improved by 0.0481204
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.926
ELB improved by 0.0460295
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.881
ELB improved by 0.0453307
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.835
ELB improved by 0.0457456
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.788
ELB improved by 0.0469784
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.739
ELB improved by 0.0488375
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.688
ELB improved by 0.051221
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.634
ELB improved by 0.0540876
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.576
ELB improved by 0.0574386
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.515
ELB improved by 0.0613106
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.449
ELB improved by 0.065772
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.378
ELB improved by 0.070916
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.301
ELB improved by 0.0768349
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.218
ELB improved by 0.0835521
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.127
ELB improved by 0.0908843
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.029
ELB improved by 0.0982482
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.924
ELB improved by 0.104565
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.816
ELB improved by 0.108537
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.706
ELB improved by 0.109353
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.599
ELB improved by 0.107198
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.496
ELB improved by 0.102979
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.398
ELB improved by 0.0976139
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.307
ELB improved by 0.0916642
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.221
ELB improved by 0.085401
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.142
ELB improved by 0.0789861
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.07
ELB improved by 0.0725776
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.004
ELB improved by 0.0663602
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.943
ELB improved by 0.0605439
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.888
ELB improved by 0.0553562
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.837
ELB improved by 0.0510393
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.789
ELB improved by 0.0478535
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.743
ELB improved by 0.0460855
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.697
ELB improved by 0.0460511
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.648
ELB improved by 0.0480882
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.596
ELB improved by 0.0525552
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.536
ELB improved by 0.0599159
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.465
ELB improved by 0.0710755
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.377
ELB improved by 0.0880893
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.262
ELB improved by 0.114999
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.104
ELB improved by 0.157461
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.887
ELB improved by 0.217211
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.609
ELB improved by 0.278671
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.297
ELB improved by 0.311732
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.982
ELB improved by 0.314773
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.663
ELB improved by 0.31856
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.322
ELB improved by 0.341172
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.938
ELB improved by 0.384
iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.514
ELB improved by 0.424563
iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.095
ELB improved by 0.419071
iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.719
ELB improved by 0.375738
iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.395
ELB improved by 0.323621
iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.117
ELB improved by 0.278647
iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.868
ELB improved by 0.24883
iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.65
ELB improved by 0.218038
iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.481
ELB improved by 0.168678
iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.367
ELB improved by 0.113627
iteration 144
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.295
ELB improved by 0.0729012
iteration 145
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.246
ELB improved by 0.0485655
iteration 146
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.211
ELB improved by 0.0345834
iteration 147
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.185
ELB improved by 0.0262505
iteration 148
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.164
ELB improved by 0.0210299
iteration 149
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.147
ELB improved by 0.0176006
iteration 150
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.131
ELB improved by 0.015249
iteration 151
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.118
ELB improved by 0.0135738
iteration 152
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.105
ELB improved by 0.0123401
iteration 153
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.094
ELB improved by 0.0114051
iteration 154
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.083
ELB improved by 0.0106783
iteration 155
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.073
ELB improved by 0.0101002
iteration 156
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.064
ELB improved by 0.00963043
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-873.358
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-580.616
ELB improved by 292.742
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-521.07
ELB improved by 59.5463
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-483.897
ELB improved by 37.1721
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.336
ELB improved by 15.5615
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.77
ELB improved by 6.56562
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.657
ELB improved by 4.11332
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.133
ELB improved by 3.52443
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.621
ELB improved by 3.51131
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.891
ELB improved by 3.7302
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.895
ELB improved by 3.99645
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.856
ELB improved by 4.03896
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.254
ELB improved by 3.60201
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.46
ELB improved by 2.79332
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.542
ELB improved by 1.91819
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.33
ELB improved by 1.2116
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.576
ELB improved by 0.75492
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.079
ELB improved by 0.496228
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.725
ELB improved by 0.354503
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.451
ELB improved by 0.274082
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.225
ELB improved by 0.225522
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.031
ELB improved by 0.194363
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.857
ELB improved by 0.173403
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.699
ELB improved by 0.158874
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.55
ELB improved by 0.14869
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.408
ELB improved by 0.141628
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.271
ELB improved by 0.136944
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.137
ELB improved by 0.13417
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.004
ELB improved by 0.133017
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.871
ELB improved by 0.133318
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.736
ELB improved by 0.135006
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.598
ELB improved by 0.138098
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.455
ELB improved by 0.142684
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.306
ELB improved by 0.148889
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.149
ELB improved by 0.156754
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.983
ELB improved by 0.166011
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.808
ELB improved by 0.175755
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.623
ELB improved by 0.184273
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.434
ELB improved by 0.189403
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.245
ELB improved by 0.189435
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.061
ELB improved by 0.183929
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.887
ELB improved by 0.173854
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.726
ELB improved by 0.161047
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.578
ELB improved by 0.147367
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.444
ELB improved by 0.134104
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.322
ELB improved by 0.12192
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.211
ELB improved by 0.111063
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.11
ELB improved by 0.101573
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.016
ELB improved by 0.0934033
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.93
ELB improved by 0.0864779
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.849
ELB improved by 0.0807222
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.773
ELB improved by 0.0760845
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.7
ELB improved by 0.0725581
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.63
ELB improved by 0.0702116
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.561
ELB improved by 0.0692421
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.491
ELB improved by 0.0700816
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.417
ELB improved by 0.0736221
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.336
ELB improved by 0.0817032
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.237
ELB improved by 0.0981002
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.108
ELB improved by 0.129898
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.922
ELB improved by 0.185746
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.663
ELB improved by 0.259206
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.352
ELB improved by 0.310949
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.03
ELB improved by 0.321918
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.707
ELB improved by 0.32318
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.373
ELB improved by 0.333767
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.021
ELB improved by 0.351768
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.649
ELB improved by 0.37156
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.261
ELB improved by 0.388518
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.862
ELB improved by 0.399364
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.459
ELB improved by 0.402281
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.063
ELB improved by 0.39666
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.68
ELB improved by 0.382312
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.321
ELB improved by 0.359201
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.992
ELB improved by 0.328875
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.696
ELB improved by 0.296495
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.425
ELB improved by 0.27105
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.161
ELB improved by 0.263448
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.882
ELB improved by 0.279628
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.586
ELB improved by 0.295422
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.337
ELB improved by 0.249406
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.18
ELB improved by 0.156428
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.088
ELB improved by 0.0924156
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.026
ELB improved by 0.0618099
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.98
ELB improved by 0.045788
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.944
ELB improved by 0.0360066
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.915
ELB improved by 0.0294251
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.89
ELB improved by 0.0246615
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.869
ELB improved by 0.0209976
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.851
ELB improved by 0.0180509
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.836
ELB improved by 0.0156178
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.822
ELB improved by 0.0135871
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.81
ELB improved by 0.0118911
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.8
ELB improved by 0.0104812
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.79
ELB improved by 0.00931658
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.540 0.184 2.713
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.052 | 0.002 | 0.055 | |
| getPIPs | 0.047 | 0.005 | 0.051 | |
| graper | 0.080 | 0.004 | 0.084 | |
| makeExampleData | 0.009 | 0.002 | 0.011 | |
| makeExampleDataWithUnequalGroups | 0.011 | 0.002 | 0.013 | |
| plotELBO | 0.333 | 0.014 | 0.347 | |
| plotGroupPenalties | 1.097 | 0.044 | 1.142 | |
| plotPosterior | 0.639 | 0.006 | 0.645 | |
| predict.graper | 2.039 | 0.015 | 2.054 | |
| print.graper | 0.049 | 0.003 | 0.052 | |