Britta Velten
| Snapshot Date: 2025-10-24 13:45 -0400 (Fri, 24 Oct 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 82b0592 |
| git_last_commit_date: 2025-06-24 03:15:40 -0400 (Tue, 24 Jun 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-10-25 12:03 -0400 (Sat, 25 Oct 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" | 4901 |
| lconway | macOS 12.7.6 Monterey | x86_64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4691 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4637 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4658 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 922/2361 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.25.2 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| lconway | macOS 12.7.6 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | NA | NA | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.25.2 |
| Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.25.2.tar.gz |
| StartedAt: 2025-10-25 00:19:18 -0400 (Sat, 25 Oct 2025) |
| EndedAt: 2025-10-25 00:20:48 -0400 (Sat, 25 Oct 2025) |
| EllapsedTime: 90.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.25.2.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.1 Patched (2025-08-23 r88802)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.25.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... INFO
installed size is 6.0Mb
sub-directories of 1Mb or more:
libs 5.8Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.25.2’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.22-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.22-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.22-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.22-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-858.979
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-576.118
ELB improved by 282.861
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-513.412
ELB improved by 62.7058
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-472.315
ELB improved by 41.0971
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.23
ELB improved by 17.085
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.699
ELB improved by 6.53079
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.932
ELB improved by 3.76764
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.88
ELB improved by 3.05121
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.937
ELB improved by 2.94383
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.908
ELB improved by 3.02832
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.747
ELB improved by 3.16135
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.464
ELB improved by 3.28251
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.117
ELB improved by 3.34751
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.818
ELB improved by 3.2993
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.732
ELB improved by 3.0857
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.01
ELB improved by 2.72157
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.715
ELB improved by 2.29576
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.82
ELB improved by 1.89456
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.267
ELB improved by 1.55315
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.997
ELB improved by 1.26944
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.971
ELB improved by 1.02672
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.155
ELB improved by 0.815851
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.514
ELB improved by 0.640667
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.008
ELB improved by 0.505951
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.6
ELB improved by 0.407837
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.264
ELB improved by 0.336492
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.981
ELB improved by 0.28274
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.741
ELB improved by 0.240671
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.534
ELB improved by 0.207016
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.354
ELB improved by 0.179872
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.196
ELB improved by 0.157901
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.056
ELB improved by 0.140029
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.93
ELB improved by 0.125385
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.817
ELB improved by 0.113282
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.714
ELB improved by 0.10319
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.619
ELB improved by 0.0947064
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.532
ELB improved by 0.0875222
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.45
ELB improved by 0.0813995
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.374
ELB improved by 0.076152
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.302
ELB improved by 0.0716319
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.235
ELB improved by 0.0677212
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.17
ELB improved by 0.0643246
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.109
ELB improved by 0.0613647
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.05
ELB improved by 0.0587789
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.994
ELB improved by 0.0565166
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.939
ELB improved by 0.0545371
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.886
ELB improved by 0.0528084
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.835
ELB improved by 0.0513059
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.785
ELB improved by 0.0500114
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.736
ELB improved by 0.048913
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.688
ELB improved by 0.0480043
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.641
ELB improved by 0.0472845
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.594
ELB improved by 0.0467587
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.548
ELB improved by 0.0464383
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.501
ELB improved by 0.0463429
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.455
ELB improved by 0.0465015
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.408
ELB improved by 0.0469561
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.36
ELB improved by 0.0477669
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.311
ELB improved by 0.049019
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.26
ELB improved by 0.0508343
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.207
ELB improved by 0.053388
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.15
ELB improved by 0.0569327
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.088
ELB improved by 0.0618305
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.02
ELB improved by 0.0685865
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.942
ELB improved by 0.0778623
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.851
ELB improved by 0.0904029
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.745
ELB improved by 0.106761
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.618
ELB improved by 0.126724
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.469
ELB improved by 0.148668
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.299
ELB improved by 0.169686
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.112
ELB improved by 0.187089
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.912
ELB improved by 0.20007
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.703
ELB improved by 0.209651
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.485
ELB improved by 0.217268
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.262
ELB improved by 0.223738
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.032
ELB improved by 0.229139
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.799
ELB improved by 0.233119
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.564
ELB improved by 0.235251
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.329
ELB improved by 0.23531
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.095
ELB improved by 0.233493
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.865
ELB improved by 0.2306
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.636
ELB improved by 0.228229
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.407
ELB improved by 0.229035
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.17
ELB improved by 0.237174
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.911
ELB improved by 0.258884
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.609
ELB improved by 0.302695
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.232
ELB improved by 0.376212
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.764
ELB improved by 0.468598
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.24
ELB improved by 0.524396
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.744
ELB improved by 0.495262
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.33
ELB improved by 0.413781
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.999
ELB improved by 0.331158
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.732
ELB improved by 0.26774
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.508
ELB improved by 0.223899
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.315
ELB improved by 0.192971
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.147
ELB improved by 0.167418
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.004
ELB improved by 0.143367
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.882
ELB improved by 0.122141
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.775
ELB improved by 0.106734
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.677
ELB improved by 0.0984208
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.58
ELB improved by 0.0970289
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.477
ELB improved by 0.102601
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.36
ELB improved by 0.116633
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.218
ELB improved by 0.142753
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.031
ELB improved by 0.186387
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.78
ELB improved by 0.251147
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.46
ELB improved by 0.320137
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.133
ELB improved by 0.327374
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.876
ELB improved by 0.256694
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.679
ELB improved by 0.197307
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.51
ELB improved by 0.168812
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.358
ELB improved by 0.151445
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.209
ELB improved by 0.149365
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.044
ELB improved by 0.165065
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.866
ELB improved by 0.177492
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.705
ELB improved by 0.160977
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.585
ELB improved by 0.120285
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.507
ELB improved by 0.0781669
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.46
ELB improved by 0.0472982
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.431
ELB improved by 0.0283473
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.414
ELB improved by 0.0175777
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.402
ELB improved by 0.0115345
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.394
ELB improved by 0.00807474
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-840.264
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-562.144
ELB improved by 278.12
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-500.187
ELB improved by 61.9569
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.047
ELB improved by 41.1404
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.148
ELB improved by 18.8989
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.834
ELB improved by 8.31364
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.25
ELB improved by 4.58445
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.831
ELB improved by 3.419
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.725
ELB improved by 3.1064
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.629
ELB improved by 3.09555
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.373
ELB improved by 3.2561
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.806
ELB improved by 3.567
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.792
ELB improved by 4.014
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.33
ELB improved by 4.46237
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.736
ELB improved by 4.59323
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.587
ELB improved by 4.14974
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.328
ELB improved by 3.25811
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.977
ELB improved by 2.35177
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.272
ELB improved by 1.70449
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.016
ELB improved by 1.25623
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.096
ELB improved by 0.920176
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.384
ELB improved by 0.711513
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.777
ELB improved by 0.607611
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.21
ELB improved by 0.566553
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.648
ELB improved by 0.562191
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.065
ELB improved by 0.582794
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.44
ELB improved by 0.624899
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.751
ELB improved by 0.689396
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.972
ELB improved by 0.779169
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.074
ELB improved by 0.897382
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.029
ELB improved by 1.0452
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.812
ELB improved by 1.21678
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.422
ELB improved by 1.39012
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.903
ELB improved by 1.51928
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.358
ELB improved by 1.54516
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.924
ELB improved by 1.43386
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.714
ELB improved by 1.21008
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.771
ELB improved by 0.942638
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.074
ELB improved by 0.696704
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-366.571
ELB improved by 0.50371
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-366.206
ELB improved by 0.365056
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.937
ELB improved by 0.269062
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.734
ELB improved by 0.202868
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.577
ELB improved by 0.156592
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.454
ELB improved by 0.123509
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.354
ELB improved by 0.0992171
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.274
ELB improved by 0.0808498
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.207
ELB improved by 0.0665452
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.152
ELB improved by 0.0551126
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.106
ELB improved by 0.0458083
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.068
ELB improved by 0.0381701
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.036
ELB improved by 0.0318928
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.009
ELB improved by 0.0267482
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-364.987
ELB improved by 0.0225439
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-364.968
ELB improved by 0.0191109
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-364.951
ELB improved by 0.0163032
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-364.937
ELB improved by 0.0139983
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-364.925
ELB improved by 0.0120972
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-364.915
ELB improved by 0.0105207
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-364.906
ELB improved by 0.00920662
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-842.709
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-574.444
ELB improved by 268.265
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-517.285
ELB improved by 57.1587
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-474.527
ELB improved by 42.7583
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.976
ELB improved by 21.5505
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.821
ELB improved by 8.15552
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.196
ELB improved by 3.62445
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.873
ELB improved by 2.32372
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.065
ELB improved by 1.80801
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.485
ELB improved by 1.57975
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.997
ELB improved by 1.48848
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.524
ELB improved by 1.47299
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.006
ELB improved by 1.51732
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.38
ELB improved by 1.62616
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.565
ELB improved by 1.81465
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.468
ELB improved by 2.09782
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.006
ELB improved by 2.46195
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.198
ELB improved by 2.8072
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.278
ELB improved by 2.92077
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.651
ELB improved by 2.62668
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.646
ELB improved by 2.00496
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.318
ELB improved by 1.32795
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.511
ELB improved by 0.806819
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.028
ELB improved by 0.482814
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.725
ELB improved by 0.303207
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.517
ELB improved by 0.208179
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.359
ELB improved by 0.158389
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.226
ELB improved by 0.132274
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.108
ELB improved by 0.118748
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.995
ELB improved by 0.11217
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.886
ELB improved by 0.109631
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.776
ELB improved by 0.109594
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.665
ELB improved by 0.111221
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.551
ELB improved by 0.114039
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.433
ELB improved by 0.117766
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.311
ELB improved by 0.122219
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.184
ELB improved by 0.127265
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.051
ELB improved by 0.132795
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.912
ELB improved by 0.138703
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.767
ELB improved by 0.144885
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.616
ELB improved by 0.15123
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.459
ELB improved by 0.157619
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.295
ELB improved by 0.163933
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.125
ELB improved by 0.170057
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.949
ELB improved by 0.175887
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.767
ELB improved by 0.181339
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.581
ELB improved by 0.186361
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.39
ELB improved by 0.190933
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.195
ELB improved by 0.195074
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.996
ELB improved by 0.198833
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.794
ELB improved by 0.202277
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.588
ELB improved by 0.20547
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.38
ELB improved by 0.208449
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.169
ELB improved by 0.211196
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.955
ELB improved by 0.213619
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.74
ELB improved by 0.215538
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.523
ELB improved by 0.216687
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.306
ELB improved by 0.216734
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.091
ELB improved by 0.215311
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.879
ELB improved by 0.212066
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.672
ELB improved by 0.206714
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.473
ELB improved by 0.199093
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.284
ELB improved by 0.189203
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.107
ELB improved by 0.177229
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.943
ELB improved by 0.163546
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.794
ELB improved by 0.148679
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.661
ELB improved by 0.133252
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.543
ELB improved by 0.117896
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.44
ELB improved by 0.103178
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.35
ELB improved by 0.0895333
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.273
ELB improved by 0.0772406
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.207
ELB improved by 0.0664293
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.15
ELB improved by 0.0571061
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.1
ELB improved by 0.0491914
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.058
ELB improved by 0.042555
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.021
ELB improved by 0.0370438
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.988
ELB improved by 0.0325012
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.96
ELB improved by 0.0287793
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.934
ELB improved by 0.0257451
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.911
ELB improved by 0.0232828
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.889
ELB improved by 0.0212936
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.87
ELB improved by 0.0196944
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.851
ELB improved by 0.0184158
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.834
ELB improved by 0.0173991
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.817
ELB improved by 0.0165949
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.801
ELB improved by 0.01596
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.786
ELB improved by 0.015456
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.771
ELB improved by 0.0150477
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.756
ELB improved by 0.014702
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.742
ELB improved by 0.0143877
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.728
ELB improved by 0.0140757
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.714
ELB improved by 0.0137403
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.7
ELB improved by 0.0133606
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.687
ELB improved by 0.0129221
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.675
ELB improved by 0.0124184
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.663
ELB improved by 0.011851
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.652
ELB improved by 0.0112293
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.641
ELB improved by 0.0105684
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.632
ELB improved by 0.00988671
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-861.918
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-575.163
ELB improved by 286.754
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-511.027
ELB improved by 64.1365
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-469.726
ELB improved by 41.3005
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.351
ELB improved by 19.3751
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.542
ELB improved by 8.80901
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.531
ELB improved by 5.01096
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.629
ELB improved by 3.90179
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.955
ELB improved by 3.6745
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.172
ELB improved by 3.78243
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.247
ELB improved by 3.92531
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.401
ELB improved by 3.8458
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.015
ELB improved by 3.38675
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.38
ELB improved by 2.63408
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.535
ELB improved by 1.84565
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.321
ELB improved by 1.21431
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.536
ELB improved by 0.784025
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.019
ELB improved by 0.516986
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.663
ELB improved by 0.35604
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.406
ELB improved by 0.256994
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.213
ELB improved by 0.193702
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.061
ELB improved by 0.151652
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.938
ELB improved by 0.122648
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.837
ELB improved by 0.10193
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.75
ELB improved by 0.0866452
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.675
ELB improved by 0.0750328
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.609
ELB improved by 0.0659711
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.55
ELB improved by 0.0587284
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.497
ELB improved by 0.0528164
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.449
ELB improved by 0.0479018
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.406
ELB improved by 0.0437526
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.365
ELB improved by 0.0402037
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.328
ELB improved by 0.0371351
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.294
ELB improved by 0.0344579
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.262
ELB improved by 0.0321047
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.232
ELB improved by 0.0300237
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.204
ELB improved by 0.028174
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.177
ELB improved by 0.0265229
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.152
ELB improved by 0.0250439
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.128
ELB improved by 0.023715
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.106
ELB improved by 0.0225181
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.084
ELB improved by 0.0214376
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.064
ELB improved by 0.0204606
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.044
ELB improved by 0.0195756
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.026
ELB improved by 0.0187729
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.007
ELB improved by 0.0180441
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.99
ELB improved by 0.0173818
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.973
ELB improved by 0.0167793
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.957
ELB improved by 0.0162309
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.941
ELB improved by 0.0157316
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.926
ELB improved by 0.0152768
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.911
ELB improved by 0.0148626
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.897
ELB improved by 0.0144853
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.883
ELB improved by 0.0141418
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.869
ELB improved by 0.0138292
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.855
ELB improved by 0.0135452
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.842
ELB improved by 0.0132873
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.829
ELB improved by 0.0130537
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.816
ELB improved by 0.0128426
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.803
ELB improved by 0.0126524
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.791
ELB improved by 0.0124819
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.779
ELB improved by 0.0123299
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.766
ELB improved by 0.0121954
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.754
ELB improved by 0.0120777
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.742
ELB improved by 0.0119761
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.73
ELB improved by 0.0118901
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.719
ELB improved by 0.0118194
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.707
ELB improved by 0.011764
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.695
ELB improved by 0.0117239
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.683
ELB improved by 0.0116993
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.672
ELB improved by 0.0116907
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.66
ELB improved by 0.0116988
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.648
ELB improved by 0.0117246
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.637
ELB improved by 0.0117694
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.625
ELB improved by 0.0118348
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.613
ELB improved by 0.0119231
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.601
ELB improved by 0.0120368
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.589
ELB improved by 0.0121796
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.576
ELB improved by 0.0123557
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.564
ELB improved by 0.0125709
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.551
ELB improved by 0.0128322
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.538
ELB improved by 0.0131492
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.524
ELB improved by 0.0135342
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.51
ELB improved by 0.0140039
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.496
ELB improved by 0.0145807
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.48
ELB improved by 0.0152961
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.464
ELB improved by 0.0161943
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.447
ELB improved by 0.0173396
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.428
ELB improved by 0.0188275
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.407
ELB improved by 0.0208038
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.384
ELB improved by 0.0234979
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.356
ELB improved by 0.0272808
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.324
ELB improved by 0.0327705
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.283
ELB improved by 0.0410195
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.229
ELB improved by 0.0538423
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.154
ELB improved by 0.0743219
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.047
ELB improved by 0.107364
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.888
ELB improved by 0.159466
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.652
ELB improved by 0.235356
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.323
ELB improved by 0.329012
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.905
ELB improved by 0.41824
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.416
ELB improved by 0.488549
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.858
ELB improved by 0.558641
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.21
ELB improved by 0.647859
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.456
ELB improved by 0.75341
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.53
ELB improved by 0.926843
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.255
ELB improved by 1.27496
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.735
ELB improved by 1.5194
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.323
ELB improved by 1.41256
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.088
ELB improved by 1.23509
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.049
ELB improved by 1.03901
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.213
ELB improved by 0.835725
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.557
ELB improved by 0.65616
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.041
ELB improved by 0.51594
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.605
ELB improved by 0.435768
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.15
ELB improved by 0.454532
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.533
ELB improved by 0.617307
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.703
ELB improved by 0.830494
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.868
ELB improved by 0.834346
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.139
ELB improved by 0.729263
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.433
ELB improved by 0.706138
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.737
ELB improved by 0.695933
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.17
ELB improved by 0.566532
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.776
ELB improved by 0.394682
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.524
ELB improved by 0.251887
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.371
ELB improved by 0.15307
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.278
ELB improved by 0.0926676
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.221
ELB improved by 0.0575421
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.183
ELB improved by 0.0374224
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.157
ELB improved by 0.0258278
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.138
ELB improved by 0.0189927
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.124
ELB improved by 0.0148208
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.111
ELB improved by 0.0121607
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.101
ELB improved by 0.0103776
iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.092
ELB improved by 0.00911801
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.214 0.177 2.381
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.049 | 0.005 | 0.054 | |
| getPIPs | 0.047 | 0.005 | 0.052 | |
| graper | 0.084 | 0.001 | 0.085 | |
| makeExampleData | 0.011 | 0.000 | 0.010 | |
| makeExampleDataWithUnequalGroups | 0.013 | 0.000 | 0.012 | |
| plotELBO | 0.334 | 0.031 | 0.364 | |
| plotGroupPenalties | 1.112 | 0.057 | 1.168 | |
| plotPosterior | 0.644 | 0.009 | 0.654 | |
| predict.graper | 2.071 | 0.012 | 2.084 | |
| print.graper | 0.047 | 0.004 | 0.052 | |