Britta Velten
| Snapshot Date: 2026-01-05 13:45 -0500 (Mon, 05 Jan 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_22 |
| git_last_commit: 76fc31b |
| git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2026-01-08 11:58 -0500 (Thu, 08 Jan 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" | 4883 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4671 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 922/2361 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.26.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.26.0 |
| Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.26.0.tar.gz |
| StartedAt: 2026-01-06 00:08:30 -0500 (Tue, 06 Jan 2026) |
| EndedAt: 2026-01-06 00:10:02 -0500 (Tue, 06 Jan 2026) |
| EllapsedTime: 92.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.26.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.2 (2025-10-31)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.26.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... INFO
installed size is 6.1Mb
sub-directories of 1Mb or more:
libs 6.0Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.26.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.22-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.22-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.22-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.22-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-845.057
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-565.309
ELB improved by 279.748
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-506.237
ELB improved by 59.0721
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-469.346
ELB improved by 36.8906
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.12
ELB improved by 15.2266
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.428
ELB improved by 5.69153
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.035
ELB improved by 3.39357
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.157
ELB improved by 2.87773
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.28
ELB improved by 2.87643
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.123
ELB improved by 3.15715
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.49
ELB improved by 3.63361
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.293
ELB improved by 4.19706
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.701
ELB improved by 4.59137
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.239
ELB improved by 4.46216
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.543
ELB improved by 3.69642
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.913
ELB improved by 2.62987
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.171
ELB improved by 1.74182
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.005
ELB improved by 1.16598
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.191
ELB improved by 0.814195
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.576
ELB improved by 0.614972
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.071
ELB improved by 0.504615
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.631
ELB improved by 0.43991
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.232
ELB improved by 0.399561
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.858
ELB improved by 0.373694
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.5
ELB improved by 0.357548
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.152
ELB improved by 0.348619
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.807
ELB improved by 0.345132
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.462
ELB improved by 0.345057
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.116
ELB improved by 0.345841
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.77
ELB improved by 0.345353
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.427
ELB improved by 0.343355
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.085
ELB improved by 0.341694
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.742
ELB improved by 0.34292
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.393
ELB improved by 0.349058
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.032
ELB improved by 0.361302
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.652
ELB improved by 0.380114
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.247
ELB improved by 0.405261
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.811
ELB improved by 0.435654
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.342
ELB improved by 0.469048
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.84
ELB improved by 0.501757
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.312
ELB improved by 0.528698
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.767
ELB improved by 0.544144
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.224
ELB improved by 0.543342
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.7
ELB improved by 0.524435
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.21
ELB improved by 0.489447
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.767
ELB improved by 0.443455
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.374
ELB improved by 0.392501
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.032
ELB improved by 0.341901
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.737
ELB improved by 0.295818
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.479
ELB improved by 0.257511
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.25
ELB improved by 0.229408
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.037
ELB improved by 0.213012
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.828
ELB improved by 0.208729
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.613
ELB improved by 0.214662
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.391
ELB improved by 0.222393
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.178
ELB improved by 0.21311
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.005
ELB improved by 0.173094
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.886
ELB improved by 0.119069
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.809
ELB improved by 0.0765431
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.758
ELB improved by 0.0507304
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.722
ELB improved by 0.0358885
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.695
ELB improved by 0.0269593
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.674
ELB improved by 0.0212249
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.657
ELB improved by 0.0173309
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.642
ELB improved by 0.0145689
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.63
ELB improved by 0.0125393
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.619
ELB improved by 0.0110011
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.609
ELB improved by 0.00980212
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-888.987
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-580.998
ELB improved by 307.989
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-519.487
ELB improved by 61.5105
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.95
ELB improved by 38.5368
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.151
ELB improved by 16.7997
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.173
ELB improved by 6.97797
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.67
ELB improved by 4.50266
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.555
ELB improved by 4.11543
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.054
ELB improved by 4.50046
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.709
ELB improved by 5.34569
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.487
ELB improved by 6.22128
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.157
ELB improved by 6.32976
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.932
ELB improved by 5.22537
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.351
ELB improved by 3.58114
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.082
ELB improved by 2.26912
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.592
ELB improved by 1.48966
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.519
ELB improved by 1.07337
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.665
ELB improved by 0.853901
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.926
ELB improved by 0.739297
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.239
ELB improved by 0.686439
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.563
ELB improved by 0.675902
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.868
ELB improved by 0.695591
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.136
ELB improved by 0.732175
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.357
ELB improved by 0.77898
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.516
ELB improved by 0.840925
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.61
ELB improved by 0.905539
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.668
ELB improved by 0.942273
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.713
ELB improved by 0.955093
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.741
ELB improved by 0.971664
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.725
ELB improved by 1.01625
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.607
ELB improved by 1.11784
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.306
ELB improved by 1.30107
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.814
ELB improved by 1.49141
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.293
ELB improved by 1.52098
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.889
ELB improved by 1.40404
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.678
ELB improved by 1.21138
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.698
ELB improved by 0.980244
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.944
ELB improved by 0.754263
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.377
ELB improved by 0.566172
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.952
ELB improved by 0.425307
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.628
ELB improved by 0.323825
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.38
ELB improved by 0.248219
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.192
ELB improved by 0.188175
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.052
ELB improved by 0.139791
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.949
ELB improved by 0.102768
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.873
ELB improved by 0.0763476
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.815
ELB improved by 0.0583316
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.768
ELB improved by 0.0461444
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.731
ELB improved by 0.0377068
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.699
ELB improved by 0.0316258
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.672
ELB improved by 0.0270478
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.649
ELB improved by 0.0234662
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.628
ELB improved by 0.0205785
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.61
ELB improved by 0.0181983
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.594
ELB improved by 0.0162054
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.579
ELB improved by 0.0145182
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.566
ELB improved by 0.0130783
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.554
ELB improved by 0.0118421
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.543
ELB improved by 0.0107758
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.534
ELB improved by 0.00985256
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-884.562
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-584.585
ELB improved by 299.977
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-522.512
ELB improved by 62.0729
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-483.193
ELB improved by 39.3187
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.32
ELB improved by 16.8727
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.083
ELB improved by 7.23792
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.169
ELB improved by 4.91364
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.757
ELB improved by 4.41164
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.347
ELB improved by 4.41063
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.732
ELB improved by 4.61506
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.922
ELB improved by 4.8093
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.239
ELB improved by 4.68338
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.196
ELB improved by 4.04259
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.089
ELB improved by 3.10735
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.802
ELB improved by 2.28741
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.058
ELB improved by 1.7431
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.77
ELB improved by 1.28807
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.92
ELB improved by 0.8507
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.37
ELB improved by 0.550028
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.002
ELB improved by 0.368112
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.743
ELB improved by 0.258697
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.548
ELB improved by 0.194969
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.39
ELB improved by 0.15791
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.255
ELB improved by 0.135255
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.134
ELB improved by 0.120278
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.025
ELB improved by 0.109581
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.923
ELB improved by 0.101456
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.828
ELB improved by 0.0950074
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.739
ELB improved by 0.0897245
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.653
ELB improved by 0.0852936
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.572
ELB improved by 0.0815051
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.494
ELB improved by 0.0782101
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.418
ELB improved by 0.0752982
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.346
ELB improved by 0.0726847
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.275
ELB improved by 0.0703039
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.207
ELB improved by 0.0681048
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.141
ELB improved by 0.0660484
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.077
ELB improved by 0.0641054
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.015
ELB improved by 0.0622551
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.954
ELB improved by 0.0604839
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.896
ELB improved by 0.0587844
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.838
ELB improved by 0.0571541
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.783
ELB improved by 0.0555949
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.729
ELB improved by 0.0541114
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.676
ELB improved by 0.0527108
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.625
ELB improved by 0.0514017
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.574
ELB improved by 0.0501936
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.525
ELB improved by 0.0490963
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.477
ELB improved by 0.0481195
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.43
ELB improved by 0.0472729
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.383
ELB improved by 0.0465657
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.337
ELB improved by 0.0460066
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.292
ELB improved by 0.0456042
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.246
ELB improved by 0.0453672
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.201
ELB improved by 0.0453044
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.156
ELB improved by 0.0454252
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.11
ELB improved by 0.0457397
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.064
ELB improved by 0.0462596
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.017
ELB improved by 0.0469981
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.969
ELB improved by 0.0479705
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.919
ELB improved by 0.0491948
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.869
ELB improved by 0.0506918
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.816
ELB improved by 0.052486
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.762
ELB improved by 0.0546058
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.705
ELB improved by 0.0570842
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.645
ELB improved by 0.0599596
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.581
ELB improved by 0.0632759
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.514
ELB improved by 0.0670836
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.443
ELB improved by 0.0714406
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.366
ELB improved by 0.0764127
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.284
ELB improved by 0.0820751
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.196
ELB improved by 0.088514
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.1
ELB improved by 0.09583
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.996
ELB improved by 0.104143
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.882
ELB improved by 0.113604
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.758
ELB improved by 0.124416
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.621
ELB improved by 0.136872
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.47
ELB improved by 0.151431
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.301
ELB improved by 0.168846
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.11
ELB improved by 0.190322
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.893
ELB improved by 0.217456
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.642
ELB improved by 0.250846
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.357
ELB improved by 0.285159
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.053
ELB improved by 0.303885
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.762
ELB improved by 0.291511
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.506
ELB improved by 0.255839
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.289
ELB improved by 0.216446
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.106
ELB improved by 0.183251
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.947
ELB improved by 0.158562
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.802
ELB improved by 0.145321
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.648
ELB improved by 0.154029
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.43
ELB improved by 0.217595
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.021
ELB improved by 0.40925
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.317
ELB improved by 0.704039
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.606
ELB improved by 0.711131
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.168
ELB improved by 0.437594
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.929
ELB improved by 0.239966
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.785
ELB improved by 0.14355
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.689
ELB improved by 0.0958129
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.619
ELB improved by 0.0698365
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.565
ELB improved by 0.0540499
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.522
ELB improved by 0.043429
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.486
ELB improved by 0.0357257
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.456
ELB improved by 0.0298739
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.431
ELB improved by 0.0253136
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.409
ELB improved by 0.0217062
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.39
ELB improved by 0.0188193
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.374
ELB improved by 0.0164807
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.359
ELB improved by 0.014561
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.346
ELB improved by 0.0129634
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.335
ELB improved by 0.0116169
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.324
ELB improved by 0.0104697
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.315
ELB improved by 0.00948412
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-839.473
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-565.235
ELB improved by 274.238
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-504.803
ELB improved by 60.4316
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.977
ELB improved by 43.8261
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.693
ELB improved by 19.284
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.832
ELB improved by 6.86037
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.514
ELB improved by 3.31854
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.45
ELB improved by 2.06401
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.91
ELB improved by 1.53999
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.61
ELB improved by 1.30036
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.425
ELB improved by 1.18413
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.301
ELB improved by 1.1245
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.212
ELB improved by 1.0892
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.15
ELB improved by 1.06195
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.116
ELB improved by 1.03395
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.116
ELB improved by 0.99981
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.16
ELB improved by 0.955913
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.26
ELB improved by 0.900208
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.427
ELB improved by 0.832458
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.673
ELB improved by 0.754434
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.003
ELB improved by 0.669631
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.421
ELB improved by 0.582537
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.923
ELB improved by 0.497786
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.504
ELB improved by 0.419482
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.153
ELB improved by 0.350685
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.86
ELB improved by 0.293112
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.613
ELB improved by 0.247099
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.401
ELB improved by 0.211869
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.215
ELB improved by 0.185959
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.047
ELB improved by 0.167619
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.892
ELB improved by 0.155074
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.745
ELB improved by 0.146655
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.605
ELB improved by 0.140874
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.468
ELB improved by 0.136506
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.335
ELB improved by 0.132676
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.207
ELB improved by 0.1289
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.082
ELB improved by 0.12502
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.96
ELB improved by 0.121072
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.843
ELB improved by 0.117146
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.73
ELB improved by 0.113301
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.62
ELB improved by 0.109547
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.515
ELB improved by 0.10586
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.412
ELB improved by 0.102205
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.314
ELB improved by 0.098556
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.219
ELB improved by 0.0948991
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.128
ELB improved by 0.0912383
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.04
ELB improved by 0.0875901
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.956
ELB improved by 0.08398
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.876
ELB improved by 0.0804381
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.799
ELB improved by 0.0769956
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.725
ELB improved by 0.0736818
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.654
ELB improved by 0.0705225
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.587
ELB improved by 0.0675388
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.522
ELB improved by 0.0647471
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.46
ELB improved by 0.0621591
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.4
ELB improved by 0.0597821
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.343
ELB improved by 0.0576204
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.287
ELB improved by 0.0556749
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.233
ELB improved by 0.053945
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.181
ELB improved by 0.0524285
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.129
ELB improved by 0.0511223
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.079
ELB improved by 0.0500228
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.03
ELB improved by 0.0491264
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.982
ELB improved by 0.0484295
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.934
ELB improved by 0.0479287
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.886
ELB improved by 0.0476209
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.839
ELB improved by 0.0475039
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.791
ELB improved by 0.0475762
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.743
ELB improved by 0.0478379
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.695
ELB improved by 0.0482915
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.646
ELB improved by 0.0489431
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.596
ELB improved by 0.0498039
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.545
ELB improved by 0.0508921
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.493
ELB improved by 0.0522359
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.439
ELB improved by 0.053876
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.383
ELB improved by 0.0558698
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.325
ELB improved by 0.058296
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.264
ELB improved by 0.0612601
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.199
ELB improved by 0.0649013
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.13
ELB improved by 0.0694006
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.055
ELB improved by 0.0749884
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.973
ELB improved by 0.0819463
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.882
ELB improved by 0.0905903
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.781
ELB improved by 0.1012
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.667
ELB improved by 0.113838
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.539
ELB improved by 0.127981
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.397
ELB improved by 0.142044
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.244
ELB improved by 0.153244
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.085
ELB improved by 0.158572
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.929
ELB improved by 0.156697
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.78
ELB improved by 0.148918
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.642
ELB improved by 0.137977
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.515
ELB improved by 0.126251
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.4
ELB improved by 0.115026
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.296
ELB improved by 0.104731
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.2
ELB improved by 0.0953731
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.113
ELB improved by 0.0868205
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.034
ELB improved by 0.0789363
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.963
ELB improved by 0.0716192
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.898
ELB improved by 0.0648058
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.84
ELB improved by 0.0584608
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.787
ELB improved by 0.0525664
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.74
ELB improved by 0.0471147
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.698
ELB improved by 0.0421015
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.66
ELB improved by 0.0375223
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.627
ELB improved by 0.0333687
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.597
ELB improved by 0.0296266
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.571
ELB improved by 0.0262759
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.548
ELB improved by 0.0232912
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.527
ELB improved by 0.0206439
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.509
ELB improved by 0.0183032
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.493
ELB improved by 0.0162386
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.478
ELB improved by 0.0144203
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.465
ELB improved by 0.0128204
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.454
ELB improved by 0.0114133
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.444
ELB improved by 0.0101758
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.435
ELB improved by 0.00908711
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.453 0.162 2.604
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.053 | 0.001 | 0.054 | |
| getPIPs | 0.050 | 0.001 | 0.051 | |
| graper | 0.081 | 0.004 | 0.085 | |
| makeExampleData | 0.011 | 0.000 | 0.011 | |
| makeExampleDataWithUnequalGroups | 0.011 | 0.002 | 0.012 | |
| plotELBO | 0.340 | 0.023 | 0.362 | |
| plotGroupPenalties | 1.166 | 0.048 | 1.214 | |
| plotPosterior | 0.715 | 0.004 | 0.719 | |
| predict.graper | 2.049 | 0.023 | 2.071 | |
| print.graper | 0.046 | 0.012 | 0.058 | |