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This page was generated on 2025-10-27 12:45 -0400 (Mon, 27 Oct 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4637 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 2094/2361 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| SpectriPy 0.99.13 (landing page) Johannes Rainer
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | ERROR | ERROR | skipped | skipped | ||||||||
|
To the developers/maintainers of the SpectriPy package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SpectriPy.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: SpectriPy |
| Version: 0.99.13 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data SpectriPy |
| StartedAt: 2025-10-26 18:07:20 -0400 (Sun, 26 Oct 2025) |
| EndedAt: 2025-10-26 18:07:40 -0400 (Sun, 26 Oct 2025) |
| EllapsedTime: 19.2 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data SpectriPy
###
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* checking for file ‘SpectriPy/DESCRIPTION’ ... OK
* preparing ‘SpectriPy’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
-----------------------------------
* installing *source* package ‘SpectriPy’ ...
** this is package ‘SpectriPy’ version ‘0.99.13’
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
error: Failed to fetch: `https://pypi.org/simple/spectrum-utils/`
Caused by: Request failed after 3 retries
Caused by: error sending request for url (https://pypi.org/simple/spectrum-utils/)
Caused by: client error (Connect)
Caused by: tls handshake eof
uv error code: 2
-- Current requirements -------------------------------------------------
Python: >=3.12
Packages: numpy, matchms>=0.31, spectrum_utils>=0.3.2, numpy>=2.2.0
-------------------------------------------------------------------------
Hint: If you are temporarily offline, try setting `Sys.setenv(UV_OFFLINE=1)`.
Error in uv_get_or_create_env() :
Call `py_require()` to remove or replace conflicting requirements.
Error: package or namespace load failed for ‘SpectriPy’:
.onLoad failed in loadNamespace() for 'SpectriPy', details:
call: NULL
error: Unable to initialize the Python environment
Error: loading failed
Execution halted
ERROR: loading failed
* removing ‘/private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmpyzApTs/Rinst836a6f29d108/SpectriPy’
-----------------------------------
ERROR: package installation failed