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This page was generated on 2025-10-27 12:45 -0400 (Mon, 27 Oct 2025).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson3macOS 13.7.7 Venturaarm644.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" 4637
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

All results for package ShortRead


To the developers/maintainers of the ShortRead package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ShortRead.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Package 2005/2361HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ShortRead 1.67.1  (landing page)
Bioconductor Package Maintainer
Snapshot Date: 2025-10-26 13:45 -0400 (Sun, 26 Oct 2025)
git_url: https://git.bioconductor.org/packages/ShortRead
git_branch: devel
git_last_commit: d2f69b8
git_last_commit_date: 2025-07-24 19:09:36 -0400 (Thu, 24 Jul 2025)
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published


Results for Bioconductor software packages that depend directly on package ShortRead

QUICK STATSOS / ArchINSTALLBUILDCHECKBUILD BIN
kjohnson3macOS 13.7.7 Ventura / arm64
0126
0423
00419
0023
Package 1/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
amplican 1.31.2  (landing page)
Eivind Valen
git_last_commit: 48e5f7d
git_last_commit_date: 2025-07-11 08:07:29 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  ERROR    ERROR  skippedskipped
Package 2/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
basecallQC 1.33.0  (landing page)
Thomas Carroll
git_last_commit: 3b9d7e5
git_last_commit_date: 2025-04-15 11:10:19 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 3/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BEAT 1.47.0  (landing page)
Kemal Akman
git_last_commit: 4710ea8
git_last_commit_date: 2025-04-15 10:28:19 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 4/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CellBarcode 1.15.0  (landing page)
Wenjie Sun
git_last_commit: 232852c
git_last_commit_date: 2025-04-15 12:42:37 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 5/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
chipseq 1.59.0  (landing page)
Bioconductor Package Maintainer
git_last_commit: 01cac64
git_last_commit_date: 2025-04-15 09:45:02 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
Package 6/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ChIPseqR 1.63.0  (landing page)
Peter Humburg
git_last_commit: 836e9bb
git_last_commit_date: 2025-04-15 09:46:09 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 7/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ChIPsim 1.63.0  (landing page)
Peter Humburg
git_last_commit: 3115ee6
git_last_commit_date: 2025-04-15 09:45:35 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 8/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CircSeqAlignTk 1.11.2  (landing page)
Jianqiang Sun
git_last_commit: a6c35fd
git_last_commit_date: 2025-05-09 01:46:13 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 9/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
dada2 1.37.0  (landing page)
Benjamin Callahan
git_last_commit: d5d062a
git_last_commit_date: 2025-04-15 10:58:46 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
Package 10/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
easyRNASeq 2.45.1  (landing page)
Nicolas Delhomme
git_last_commit: 6c3c04a
git_last_commit_date: 2025-06-23 19:43:46 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    ERROR  skippedskipped
Package 11/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
EDASeq 2.43.0  (landing page)
Davide Risso
git_last_commit: 9eb6330
git_last_commit_date: 2025-04-15 10:10:22 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 12/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
esATAC 1.31.1  (landing page)
Zheng Wei
git_last_commit: 999ba9f
git_last_commit_date: 2025-07-23 01:35:39 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 13/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
FastqCleaner 1.27.0  (landing page)
Leandro Roser
git_last_commit: f3a35cc
git_last_commit_date: 2025-04-15 11:34:12 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 14/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
FLAMES 2.3.5  (landing page)
Changqing Wang
git_last_commit: 5771592
git_last_commit_date: 2025-09-12 02:43:50 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 15/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GOTHiC 1.45.1  (landing page)
Borbala Mifsud
git_last_commit: 957985e
git_last_commit_date: 2025-07-22 20:01:31 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 16/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
icetea 1.27.1  (landing page)
Vivek Bhardwaj
git_last_commit: 94f284e
git_last_commit_date: 2025-07-23 19:14:12 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
Package 17/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
IONiseR 2.33.0  (landing page)
Mike Smith
git_last_commit: 2f8ae1c
git_last_commit_date: 2025-04-15 10:51:43 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 18/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
nucleR 2.41.1  (landing page)
Alba Sala
git_last_commit: 29c0c53
git_last_commit_date: 2025-07-22 13:46:37 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
Package 19/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
OTUbase 1.59.0  (landing page)
Daniel Beck
git_last_commit: d1952e1
git_last_commit_date: 2025-04-15 10:00:35 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 20/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
QuasR 1.49.3  (landing page)
Michael Stadler
git_last_commit: aa5c77a
git_last_commit_date: 2025-06-23 19:20:54 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    ERROR  skippedskipped
Package 21/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
R453Plus1Toolbox 1.59.0  (landing page)
Hans-Ulrich Klein
git_last_commit: edf5064
git_last_commit_date: 2025-04-15 10:00:59 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    ERROR  skippedskipped
Package 22/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Rqc 1.43.0  (landing page)
Welliton Souza
git_last_commit: c099697
git_last_commit_date: 2025-04-15 10:36:13 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 23/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RSVSim 1.49.0  (landing page)
Christoph Bartenhagen
git_last_commit: 13f96e0
git_last_commit_date: 2025-04-15 10:17:06 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 24/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
scruff 1.27.1  (landing page)
Zhe Wang
git_last_commit: ef8838f
git_last_commit_date: 2025-10-06 15:16:04 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 25/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
segmentSeq 2.43.1  (landing page)
Samuel Granjeaud
git_last_commit: 86958e3
git_last_commit_date: 2025-07-23 17:33:37 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 26/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
systemPipeR 2.15.2  (landing page)
Thomas Girke
git_last_commit: a6c070b
git_last_commit_date: 2025-05-26 17:38:10 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 27/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
UMI4Cats 1.19.3  (landing page)
Mireia Ramos-Rodriguez
git_last_commit: 2dfa73c
git_last_commit_date: 2025-10-21 06:59:01 -0400
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published