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This page was generated on 2025-10-27 12:45 -0400 (Mon, 27 Oct 2025).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson3macOS 13.7.7 Venturaarm644.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" 4637
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 2057/2361HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SNPediaR 1.35.0  (landing page)
David Montaner
Snapshot Date: 2025-10-26 13:45 -0400 (Sun, 26 Oct 2025)
git_url: https://git.bioconductor.org/packages/SNPediaR
git_branch: devel
git_last_commit: 54647c0
git_last_commit_date: 2025-04-15 11:03:53 -0400 (Tue, 15 Apr 2025)
kjohnson3macOS 13.7.7 Ventura / arm64  OK    ERROR  skippedskipped

BUILD results for SNPediaR on kjohnson3

To the developers/maintainers of the SNPediaR package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SNPediaR.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: SNPediaR
Version: 1.35.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data SNPediaR
StartedAt: 2025-10-26 18:03:48 -0400 (Sun, 26 Oct 2025)
EndedAt: 2025-10-26 18:04:21 -0400 (Sun, 26 Oct 2025)
EllapsedTime: 32.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data SNPediaR
###
##############################################################################
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* checking for file ‘SNPediaR/DESCRIPTION’ ... OK
* preparing ‘SNPediaR’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘SNPediaR.Rmd’ using rmarkdown

Quitting from SNPediaR.Rmd:49-53 [unnamed-chunk-1]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! Could not resolve host: bots.snpedia.com
---
Backtrace:
    ▆
 1. ├─SNPediaR::getPages(titles = "Rs53576")
 2. │ └─RCurl::getURL(pagesURL)
 3. │   └─RCurl::curlPerform(curl = curl, .opts = opts, .encoding = .encoding)
 4. └─RCurl (local) `<fn>`(6L, "Could not resolve host: bots.snpedia.com", TRUE)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'SNPediaR.Rmd' failed with diagnostics:
Could not resolve host: bots.snpedia.com
--- failed re-building ‘SNPediaR.Rmd’

SUMMARY: processing the following file failed:
  ‘SNPediaR.Rmd’

Error: Vignette re-building failed.
Execution halted