Back to Workflows build report for BioC 3.21

This page was generated on 2024-12-10 16:30 -0500 (Tue, 10 Dec 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2024-10-21 r87258) -- "Unsuffered Consequences" 4749
palomino7Windows Server 2022 Datacenterx64R Under development (unstable) (2024-10-26 r87273 ucrt) -- "Unsuffered Consequences" 4461
lconwaymacOS 12.7.1 Montereyx86_64R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences" 4411
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 17/30HostnameOS / ArchINSTALLBUILD
maEndToEnd 2.27.0  (landing page)
Stefanie Reisenauer
Snapshot Date: 2024-12-10 12:45 -0500 (Tue, 10 Dec 2024)
git_url: https://git.bioconductor.org/packages/maEndToEnd
git_branch: devel
git_last_commit: 22320c5
git_last_commit_date: 2024-10-29 10:03:03 -0500 (Tue, 29 Oct 2024)
nebbiolo1Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK  YES
palomino7Windows Server 2022 Datacenter / x64  OK    ERROR  
lconwaymacOS 12.7.1 Monterey / x86_64  ERROR    ERROR  


BUILD results for maEndToEnd on lconway

To the developers/maintainers of the maEndToEnd package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: maEndToEnd
Version: 2.27.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data maEndToEnd
StartedAt: 2024-12-10 13:04:49 -0500 (Tue, 10 Dec 2024)
EndedAt: 2024-12-10 13:04:50 -0500 (Tue, 10 Dec 2024)
EllapsedTime: 1.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data maEndToEnd
###
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* checking for file ‘maEndToEnd/DESCRIPTION’ ... OK
* preparing ‘maEndToEnd’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
ERROR: dependencies ‘ArrayExpress’, ‘pd.hugene.1.0.st.v1’, ‘oligo’ are not available for package ‘maEndToEnd’
Perhaps try a variation of:
install.packages(c('ArrayExpress', 'pd.hugene.1.0.st.v1', 'oligo'))
* removing ‘/private/tmp/RtmpdA5rpv/Rinstf86e64f0bc6b/maEndToEnd’
      -----------------------------------
ERROR: package installation failed