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This page was generated on 2025-02-27 15:01 -0500 (Thu, 27 Feb 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" | 4700 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 238/430 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||||
| MetaScope 1.7.2 (landing page) Aubrey Odom
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | ERROR | skipped | ||||||||
|
To the developers/maintainers of the MetaScope package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: MetaScope |
| Version: 1.7.2 |
| Command: /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data MetaScope |
| StartedAt: 2025-02-27 11:26:18 -0500 (Thu, 27 Feb 2025) |
| EndedAt: 2025-02-27 11:30:31 -0500 (Thu, 27 Feb 2025) |
| EllapsedTime: 253.2 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data MetaScope ### ############################################################################## ############################################################################## * checking for file ‘MetaScope/DESCRIPTION’ ... OK * preparing ‘MetaScope’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘MetaScope_vignette.Rmd’ using rmarkdown Building a SMALL index Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Reference file does not seem to be a FASTA file Error: Encountered internal Bowtie 2 exception (#1) Command: /home/biocbuild/bbs-3.21-bioc/R/site-library/Rbowtie2/bowtie2-build-s --wrapper basic-0 --threads 1 /tmp/RtmphqguOf/file35fd3729999e85/Staphylococcus_aureus_RF122.fasta.gz,/tmp/RtmphqguOf/file35fd3729999e85/Staphylococcus_aureus_subsp._aureus_Mu3.fasta.gz,/tmp/RtmphqguOf/file35fd3729999e85/Staphylococcus_aureus_subsp._aureus_Mu50.fasta.gz,/tmp/RtmphqguOf/file35fd3729999e85/Staphylococcus_aureus_subsp._aureus_N315.fasta.gz,/tmp/RtmphqguOf/file35fd3729999e85/Staphylococcus_aureus_subsp._aureus_ST398.fasta.gz,/tmp/RtmphqguOf/file35fd3729999e85/Staphylococcus_aureus_subsp._aureus_str._Newman.fasta.gz /tmp/RtmphqguOf/file35fd374c5851a2/target Deleting "/tmp/RtmphqguOf/file35fd374c5851a2/target.3.bt2" file written during aborted indexing attempt. Deleting "/tmp/RtmphqguOf/file35fd374c5851a2/target.4.bt2" file written during aborted indexing attempt. Deleting "/tmp/RtmphqguOf/file35fd374c5851a2/target.1.bt2" file written during aborted indexing attempt. Deleting "/tmp/RtmphqguOf/file35fd374c5851a2/target.2.bt2" file written during aborted indexing attempt. Building a SMALL index Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered empty reference sequence Warning: Encountered empty reference sequence Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Warning: Encountered reference sequence with only gaps Reference file does not seem to be a FASTA file Error: Encountered internal Bowtie 2 exception (#1) Command: /home/biocbuild/bbs-3.21-bioc/R/site-library/Rbowtie2/bowtie2-build-s --wrapper basic-0 --threads 1 /tmp/RtmphqguOf/file35fd3748904ff7/Staphylococcus_epidermidis_RP62A.fasta.gz /tmp/RtmphqguOf/file35fd374c5851a2/filter Deleting "/tmp/RtmphqguOf/file35fd374c5851a2/filter.3.bt2" file written during aborted indexing attempt. Deleting "/tmp/RtmphqguOf/file35fd374c5851a2/filter.4.bt2" file written during aborted indexing attempt. Deleting "/tmp/RtmphqguOf/file35fd374c5851a2/filter.1.bt2" file written during aborted indexing attempt. Deleting "/tmp/RtmphqguOf/file35fd374c5851a2/filter.2.bt2" file written during aborted indexing attempt. Quitting from lines 219-237 [alignment_align] (MetaScope_vignette.Rmd) Error: processing vignette 'MetaScope_vignette.Rmd' failed with diagnostics: Could not find either a valid small (.bt2) or large (.bt2l) index with basename of target at location /tmp/RtmphqguOf/file35fd374c5851a2 --- failed re-building ‘MetaScope_vignette.Rmd’ SUMMARY: processing the following file failed: ‘MetaScope_vignette.Rmd’ Error: Vignette re-building failed. Execution halted