Back to Books build report for BioC 3.21

This page was generated on 2025-04-18 14:30 -0400 (Fri, 18 Apr 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.1 LTS)x86_644.5.0 RC (2025-04-04 r88126) -- "How About a Twenty-Six" 4831
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 5/10HostnameOS / ArchINSTALLBUILDCHECK
OSCA.advanced 1.16.0  (landing page)
Ludwig Geistlinger
Snapshot Date: 2025-04-18 10:00 -0400 (Fri, 18 Apr 2025)
git_url: https://git.bioconductor.org/packages/OSCA.advanced
git_branch: RELEASE_3_21
git_last_commit: 00073f0
git_last_commit_date: 2025-04-15 10:47:23 -0400 (Tue, 15 Apr 2025)
nebbiolo1Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published

BUILD results for OSCA.advanced on nebbiolo1

To the developers/maintainers of the OSCA.advanced package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: OSCA.advanced
Version: 1.16.0
Command: /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data OSCA.advanced
StartedAt: 2025-04-18 10:17:06 -0400 (Fri, 18 Apr 2025)
EndedAt: 2025-04-18 12:31:35 -0400 (Fri, 18 Apr 2025)
EllapsedTime: 8069.3 seconds
RetCode: 0
Status:   OK  
PackageFile: OSCA.advanced_1.16.0.tar.gz
PackageFileSize: 21.66 MiB

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data OSCA.advanced
###
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* checking for file ‘OSCA.advanced/DESCRIPTION’ ... OK
* preparing ‘OSCA.advanced’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* creating default NAMESPACE file
* building ‘OSCA.advanced_1.16.0.tar.gz’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘OSCA.advanced/inst/doc/book/droplet-processing_files/figure-html/mammary-swapped-barcode-rank-after-1.png’