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This page was generated on 2025-04-08 12:34 -0400 (Tue, 08 Apr 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 871
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Package 1/217HostnameOS / ArchINSTALLBUILDCHECK
affxparser 1.79.1  (landing page)
Kasper Daniel Hansen
Snapshot Date: 2025-04-08 12:00 -0400 (Tue, 08 Apr 2025)
git_url: https://git.bioconductor.org/packages/affxparser
git_branch: devel
git_last_commit: d2f1dc2
git_last_commit_date: 2025-01-06 19:06:21 -0400 (Mon, 06 Jan 2025)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  ERROR    ERROR  skipped

BUILD results for affxparser on teran2

To the developers/maintainers of the affxparser package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: affxparser
Version: 1.79.1
Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data affxparser
StartedAt: 2025-04-08 12:13:36 -0400 (Tue, 08 Apr 2025)
EndedAt: 2025-04-08 12:13:37 -0400 (Tue, 08 Apr 2025)
EllapsedTime: 1.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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###
### Running command:
###
###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data affxparser
###
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##############################################################################


* checking for file ‘affxparser/DESCRIPTION’ ... OK
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/readCdf.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/readCdfCellIndices.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/readCdfDataFrame.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/readCdfGroupNames.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/readCdfHeader.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/readCdfIsPm.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/readCdfNbrOfCellsPerUnitGroup.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/readCdfQc.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/readCdfUnitNames.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/readCdfUnits.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/readCdfUnitsWriteMap.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/readCel.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/readCelHeader.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/readCelIntensities.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/readCelRectangle.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/readCelUnits.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/readChp.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/readClf.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/readClfEnv.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/readClfHeader.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/readPgf.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/readPgfEnv.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/readPgfHeader.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/updateCel.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/updateCelUnits.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/writeCdf.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/writeCdfHeader.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/writeCdfQcUnits.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/writeCdfUnits.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/man/writeCelHeader.Rd': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/data/src/CDFQCProbeInformation.o': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/data/src/CDFQCProbeSetInformation.o': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/data/src/CHPBackgroundZone.o': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/data/src/CELData.o': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/data/src/CHPData.o': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/data/src/CHPExpressionEntry.o': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/data/src/ColumnInfo.o': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/data/src/CHPMultiDataData.o': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/data/src/DataGroupHeader.o': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/data/src/CHPTilingData.o': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/data/src/FileHeader.o': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/data/src/GenericDataHeader.o': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/data/src/CHPQuantificationData.o': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/data/src/CHPQuantificationDetectionData.o': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/data/src/CHPUniversalEntry.o': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/data/src/DataGroup.o': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/data/src/DataSet.o': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/data/src/DataSetHeader.o': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/data/src/GenericData.o': No space left on device
cp: cannot create directory '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/exception': No space left on device
cp: cannot create directory '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/fusion': No space left on device
cp: cannot create directory '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/parameter': No space left on device
cp: cannot create directory '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/parsers': No space left on device
cp: cannot create directory '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/portability': No space left on device
cp: cannot create directory '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/template': No space left on device
cp: cannot create directory '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/utils': No space left on device
cp: cannot create directory '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/calvin_files/writers': No space left on device
cp: cannot create directory '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/file': No space left on device
cp: cannot create directory '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/portability': No space left on device
cp: cannot create directory '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/fusion/util': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/000.init.c': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/Makevars': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/Makevars.win': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/RAffxErrHandler.h': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/R_affx_cdf_extras.h': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/R_affx_constants.h': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/R_affx_test_bpmap_cmdline.cpp': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/R_affx_test_cdfwriter_cmdline.cpp': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/R_affx_test_celwriter_cmdline.cpp': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/R_affx_test_cmd_line.cpp': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/_mingw.h': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/src/_mingw_gcc1002.h': No space left on device
cp: error writing '/tmp/RtmpJnygBT/Rbuild90ef45b7c7bd0/affxparser/cleanup': No space left on device
 ERROR
copying to build directory failed