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### Running command:
###
###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD check --install=check:BiocFileCache.install-out.txt --library=/home/rapidbuild/bbs-3.21-bioc-rapid/R/site-library --timings BiocFileCache_2.15.1.tar.gz
###
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* using log directory ‘/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/meat/BiocFileCache.Rcheck’
* using R Under development (unstable) (2025-01-20 r87609)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
    GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* checking for file ‘BiocFileCache/DESCRIPTION’ ... OK
* this is package ‘BiocFileCache’ version ‘2.15.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘BiocFileCache’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
.sql_clean_cache: no visible binding for global variable ‘rid’
.sql_clean_cache: no visible binding for global variable ‘access_time’
.sql_get_resource_table: no visible binding for global variable ‘rid’
.sql_get_resource_table: no visible binding for global variable ‘id’
Undefined global functions or variables:
  access_time id rid
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
                     user system elapsed
BiocFileCache-class 2.185   0.06    5.39
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
    adding: BiocFileCacheExport/BiocFileCache.sqlite (deflated 96%)
  [ FAIL 1 | WARN 5 | SKIP 0 | PASS 232 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test_BiocFileCache_class.R:44:5'): bfcadd and bfcnew works ──────────
  Error in `.util_download(x, rid[i], proxy, config, "bfcadd()", ...)`: bfcadd() failed; see warnings()
  Backtrace:
      ▆
   1. ├─BiocFileCache::bfcadd(bfc, "test-4", url, rtype = "web") at test_BiocFileCache_class.R:44:5
   2. └─BiocFileCache::bfcadd(bfc, "test-4", url, rtype = "web")
   3.   └─BiocFileCache:::.util_download(...)
  
  [ FAIL 1 | WARN 5 | SKIP 0 | PASS 232 ]
  Error: Test failures
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE

Status: 1 ERROR, 1 NOTE
See
  ‘/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/meat/BiocFileCache.Rcheck/00check.log’
for details.

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###
### Running command:
###
###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD INSTALL BiocFileCache
###
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* installing to library ‘/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library’
* installing *source* package ‘BiocFileCache’ ...
** this is package ‘BiocFileCache’ version ‘2.15.1’
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (BiocFileCache)

R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(BiocFileCache)
Loading required package: dbplyr
> 
> test_check("BiocFileCache")
  adding: BiocFileCacheExport/ (stored 0%)
  adding: BiocFileCacheExport/3912141c2082ab_file3912143c1d814d (stored 0%)
  adding: BiocFileCacheExport/file3912143c1d814d (stored 0%)
  adding: BiocFileCacheExport/BiocFileCache.sqlite (deflated 96%)
[ FAIL 1 | WARN 5 | SKIP 0 | PASS 232 ]

══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_BiocFileCache_class.R:44:5'): bfcadd and bfcnew works ──────────
Error in `.util_download(x, rid[i], proxy, config, "bfcadd()", ...)`: bfcadd() failed; see warnings()
Backtrace:
    ▆
 1. ├─BiocFileCache::bfcadd(bfc, "test-4", url, rtype = "web") at test_BiocFileCache_class.R:44:5
 2. └─BiocFileCache::bfcadd(bfc, "test-4", url, rtype = "web")
 3.   └─BiocFileCache:::.util_download(...)

[ FAIL 1 | WARN 5 | SKIP 0 | PASS 232 ]
Error: Test failures
Execution halted