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This page was generated on 2025-10-16 11:39 -0400 (Thu, 16 Oct 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4833 |
| merida1 | macOS 12.7.6 Monterey | x86_64 | 4.5.1 RC (2025-06-05 r88288) -- "Great Square Root" | 4614 |
| kjohnson1 | macOS 13.7.5 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4555 |
| kunpeng2 | Linux (openEuler 24.03 LTS) | aarch64 | R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" | 4586 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 2191/2341 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| tidySpatialExperiment 1.4.1 (landing page) William Hutchison
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| merida1 | macOS 12.7.6 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson1 | macOS 13.7.5 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| kunpeng2 | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | NA | ||||||||||
|
To the developers/maintainers of the tidySpatialExperiment package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/tidySpatialExperiment.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: tidySpatialExperiment |
| Version: 1.4.1 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:tidySpatialExperiment.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings tidySpatialExperiment_1.4.1.tar.gz |
| StartedAt: 2025-10-14 11:38:09 -0400 (Tue, 14 Oct 2025) |
| EndedAt: 2025-10-14 11:47:47 -0400 (Tue, 14 Oct 2025) |
| EllapsedTime: 578.3 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: tidySpatialExperiment.Rcheck |
| Warnings: 0 |
##############################################################################
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###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:tidySpatialExperiment.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings tidySpatialExperiment_1.4.1.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.21-bioc/meat/tidySpatialExperiment.Rcheck’
* using R version 4.5.1 RC (2025-06-05 r88288)
* using platform: x86_64-apple-darwin20
* R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 14.2.0
* running under: macOS Monterey 12.7.6
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘tidySpatialExperiment/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘tidySpatialExperiment’ version ‘1.4.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... INFO
Imports includes 24 non-default packages.
Importing from so many packages makes the package vulnerable to any of
them becoming unavailable. Move as many as possible to Suggests and
use conditionally.
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘tidySpatialExperiment’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
formatting.Rd: tbl_format_setup
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
aggregate_cells 8.23 0.277 8.814
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/Users/biocbuild/bbs-3.21-bioc/meat/tidySpatialExperiment.Rcheck/00check.log’
for details.
tidySpatialExperiment.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL tidySpatialExperiment ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library’ * installing *source* package ‘tidySpatialExperiment’ ... ** this is package ‘tidySpatialExperiment’ version ‘1.4.1’ ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tidySpatialExperiment)
tidySpatialExperiment.Rcheck/tests/testthat.Rout
R version 4.5.1 RC (2025-06-05 r88288) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin20
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(tidySpatialExperiment)
Loading required package: SpatialExperiment
Loading required package: SingleCellExperiment
Loading required package: SummarizedExperiment
Loading required package: MatrixGenerics
Loading required package: matrixStats
Attaching package: 'MatrixGenerics'
The following objects are masked from 'package:matrixStats':
colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse,
colCounts, colCummaxs, colCummins, colCumprods, colCumsums,
colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs,
colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats,
colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds,
colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads,
colWeightedMeans, colWeightedMedians, colWeightedSds,
colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet,
rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods,
rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps,
rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins,
rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks,
rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars,
rowWeightedMads, rowWeightedMeans, rowWeightedMedians,
rowWeightedSds, rowWeightedVars
Loading required package: GenomicRanges
Loading required package: stats4
Loading required package: BiocGenerics
Loading required package: generics
Attaching package: 'generics'
The following objects are masked from 'package:base':
as.difftime, as.factor, as.ordered, intersect, is.element, setdiff,
setequal, union
Attaching package: 'BiocGenerics'
The following objects are masked from 'package:stats':
IQR, mad, sd, var, xtabs
The following objects are masked from 'package:base':
Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append,
as.data.frame, basename, cbind, colnames, dirname, do.call,
duplicated, eval, evalq, get, grep, grepl, is.unsorted, lapply,
mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int,
rank, rbind, rownames, sapply, saveRDS, table, tapply, unique,
unsplit, which.max, which.min
Loading required package: S4Vectors
Attaching package: 'S4Vectors'
The following object is masked from 'package:utils':
findMatches
The following objects are masked from 'package:base':
I, expand.grid, unname
Loading required package: IRanges
Loading required package: GenomeInfoDb
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material; view with
'browseVignettes()'. To cite Bioconductor, see
'citation("Biobase")', and for packages 'citation("pkgname")'.
Attaching package: 'Biobase'
The following object is masked from 'package:MatrixGenerics':
rowMedians
The following objects are masked from 'package:matrixStats':
anyMissing, rowMedians
Loading required package: tidySingleCellExperiment
Attaching package: 'tidySingleCellExperiment'
The following object is masked from 'package:generics':
tidy
Attaching package: 'tidySpatialExperiment'
The following object is masked from 'package:tidySingleCellExperiment':
unnest_single_cell_experiment
>
> test_check("tidySpatialExperiment")
rd10xV> dir <- system.file(
rd10xV+ file.path("extdata", "10xVisium"),
rd10xV+ package = "SpatialExperiment")
rd10xV> sample_ids <- c("section1", "section2")
rd10xV> samples <- file.path(dir, sample_ids, "outs")
rd10xV> list.files(samples[1])
[1] "raw_feature_bc_matrix" "spatial"
rd10xV> list.files(file.path(samples[1], "spatial"))
[1] "scalefactors_json.json" "tissue_lowres_image.png"
[3] "tissue_positions_list.csv"
rd10xV> file.path(samples[1], "raw_feature_bc_matrix")
[1] "/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/SpatialExperiment/extdata/10xVisium/section1/outs/raw_feature_bc_matrix"
rd10xV> (spe <- read10xVisium(samples, sample_ids,
rd10xV+ type = "sparse", data = "raw",
rd10xV+ images = "lowres", load = FALSE))
# A SpatialExperiment-tibble abstraction: 99 × 7
# Features = 50 | Cells = 99 | Assays = counts
.cell in_tissue array_row array_col sample_id pxl_col_in_fullres
<chr> <lgl> <int> <int> <chr> <int>
1 AAACAACGAATAGTTC-1 FALSE 0 16 section1 2312
2 AAACAAGTATCTCCCA-1 TRUE 50 102 section1 8230
3 AAACAATCTACTAGCA-1 TRUE 3 43 section1 4170
4 AAACACCAATAACTGC-1 TRUE 59 19 section1 2519
5 AAACAGAGCGACTCCT-1 TRUE 14 94 section1 7679
6 AAACAGCTTTCAGAAG-1 FALSE 43 9 section1 1831
7 AAACAGGGTCTATATT-1 FALSE 47 13 section1 2106
8 AAACAGTGTTCCTGGG-1 FALSE 73 43 section1 4170
9 AAACATGGTGAGAGGA-1 FALSE 62 0 section1 1212
10 AAACATTTCCCGGATT-1 FALSE 61 97 section1 7886
# ℹ 89 more rows
# ℹ 1 more variable: pxl_row_in_fullres <int>
rd10xV> # base directory 'outs/' from Space Ranger can also be omitted
rd10xV> samples2 <- file.path(dir, sample_ids)
rd10xV> (spe2 <- read10xVisium(samples2, sample_ids,
rd10xV+ type = "sparse", data = "raw",
rd10xV+ images = "lowres", load = FALSE))
# A SpatialExperiment-tibble abstraction: 99 × 7
# Features = 50 | Cells = 99 | Assays = counts
.cell in_tissue array_row array_col sample_id pxl_col_in_fullres
<chr> <lgl> <int> <int> <chr> <int>
1 AAACAACGAATAGTTC-1 FALSE 0 16 section1 2312
2 AAACAAGTATCTCCCA-1 TRUE 50 102 section1 8230
3 AAACAATCTACTAGCA-1 TRUE 3 43 section1 4170
4 AAACACCAATAACTGC-1 TRUE 59 19 section1 2519
5 AAACAGAGCGACTCCT-1 TRUE 14 94 section1 7679
6 AAACAGCTTTCAGAAG-1 FALSE 43 9 section1 1831
7 AAACAGGGTCTATATT-1 FALSE 47 13 section1 2106
8 AAACAGTGTTCCTGGG-1 FALSE 73 43 section1 4170
9 AAACATGGTGAGAGGA-1 FALSE 62 0 section1 1212
10 AAACATTTCCCGGATT-1 FALSE 61 97 section1 7886
# ℹ 89 more rows
# ℹ 1 more variable: pxl_row_in_fullres <int>
rd10xV> # tabulate number of spots mapped to tissue
rd10xV> cd <- colData(spe)
rd10xV> table(
rd10xV+ in_tissue = cd$in_tissue,
rd10xV+ sample_id = cd$sample_id)
sample_id
in_tissue section1 section2
FALSE 28 27
TRUE 22 22
rd10xV> # view available images
rd10xV> imgData(spe)
DataFrame with 2 rows and 4 columns
sample_id image_id data scaleFactor
<character> <character> <list> <numeric>
1 section1 lowres #### 0.0510334
2 section2 lowres #### 0.0510334
rd10xV> dir <- system.file(
rd10xV+ file.path("extdata", "10xVisium"),
rd10xV+ package = "SpatialExperiment")
rd10xV> sample_ids <- c("section1", "section2")
rd10xV> samples <- file.path(dir, sample_ids, "outs")
rd10xV> list.files(samples[1])
[1] "raw_feature_bc_matrix" "spatial"
rd10xV> list.files(file.path(samples[1], "spatial"))
[1] "scalefactors_json.json" "tissue_lowres_image.png"
[3] "tissue_positions_list.csv"
rd10xV> file.path(samples[1], "raw_feature_bc_matrix")
[1] "/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/SpatialExperiment/extdata/10xVisium/section1/outs/raw_feature_bc_matrix"
rd10xV> (spe <- read10xVisium(samples, sample_ids,
rd10xV+ type = "sparse", data = "raw",
rd10xV+ images = "lowres", load = FALSE))
# A SpatialExperiment-tibble abstraction: 99 × 7
# Features = 50 | Cells = 99 | Assays = counts
.cell in_tissue array_row array_col sample_id pxl_col_in_fullres
<chr> <lgl> <int> <int> <chr> <int>
1 AAACAACGAATAGTTC-1 FALSE 0 16 section1 2312
2 AAACAAGTATCTCCCA-1 TRUE 50 102 section1 8230
3 AAACAATCTACTAGCA-1 TRUE 3 43 section1 4170
4 AAACACCAATAACTGC-1 TRUE 59 19 section1 2519
5 AAACAGAGCGACTCCT-1 TRUE 14 94 section1 7679
6 AAACAGCTTTCAGAAG-1 FALSE 43 9 section1 1831
7 AAACAGGGTCTATATT-1 FALSE 47 13 section1 2106
8 AAACAGTGTTCCTGGG-1 FALSE 73 43 section1 4170
9 AAACATGGTGAGAGGA-1 FALSE 62 0 section1 1212
10 AAACATTTCCCGGATT-1 FALSE 61 97 section1 7886
# ℹ 89 more rows
# ℹ 1 more variable: pxl_row_in_fullres <int>
rd10xV> # base directory 'outs/' from Space Ranger can also be omitted
rd10xV> samples2 <- file.path(dir, sample_ids)
rd10xV> (spe2 <- read10xVisium(samples2, sample_ids,
rd10xV+ type = "sparse", data = "raw",
rd10xV+ images = "lowres", load = FALSE))
# A SpatialExperiment-tibble abstraction: 99 × 7
# Features = 50 | Cells = 99 | Assays = counts
.cell in_tissue array_row array_col sample_id pxl_col_in_fullres
<chr> <lgl> <int> <int> <chr> <int>
1 AAACAACGAATAGTTC-1 FALSE 0 16 section1 2312
2 AAACAAGTATCTCCCA-1 TRUE 50 102 section1 8230
3 AAACAATCTACTAGCA-1 TRUE 3 43 section1 4170
4 AAACACCAATAACTGC-1 TRUE 59 19 section1 2519
5 AAACAGAGCGACTCCT-1 TRUE 14 94 section1 7679
6 AAACAGCTTTCAGAAG-1 FALSE 43 9 section1 1831
7 AAACAGGGTCTATATT-1 FALSE 47 13 section1 2106
8 AAACAGTGTTCCTGGG-1 FALSE 73 43 section1 4170
9 AAACATGGTGAGAGGA-1 FALSE 62 0 section1 1212
10 AAACATTTCCCGGATT-1 FALSE 61 97 section1 7886
# ℹ 89 more rows
# ℹ 1 more variable: pxl_row_in_fullres <int>
rd10xV> # tabulate number of spots mapped to tissue
rd10xV> cd <- colData(spe)
rd10xV> table(
rd10xV+ in_tissue = cd$in_tissue,
rd10xV+ sample_id = cd$sample_id)
sample_id
in_tissue section1 section2
FALSE 28 27
TRUE 22 22
rd10xV> # view available images
rd10xV> imgData(spe)
DataFrame with 2 rows and 4 columns
sample_id image_id data scaleFactor
<character> <character> <list> <numeric>
1 section1 lowres #### 0.0510334
2 section2 lowres #### 0.0510334
rd10xV> dir <- system.file(
rd10xV+ file.path("extdata", "10xVisium"),
rd10xV+ package = "SpatialExperiment")
rd10xV> sample_ids <- c("section1", "section2")
rd10xV> samples <- file.path(dir, sample_ids, "outs")
rd10xV> list.files(samples[1])
[1] "raw_feature_bc_matrix" "spatial"
rd10xV> list.files(file.path(samples[1], "spatial"))
[1] "scalefactors_json.json" "tissue_lowres_image.png"
[3] "tissue_positions_list.csv"
rd10xV> file.path(samples[1], "raw_feature_bc_matrix")
[1] "/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/SpatialExperiment/extdata/10xVisium/section1/outs/raw_feature_bc_matrix"
rd10xV> (spe <- read10xVisium(samples, sample_ids,
rd10xV+ type = "sparse", data = "raw",
rd10xV+ images = "lowres", load = FALSE))
# A SpatialExperiment-tibble abstraction: 99 × 7
# Features = 50 | Cells = 99 | Assays = counts
.cell in_tissue array_row array_col sample_id pxl_col_in_fullres
<chr> <lgl> <int> <int> <chr> <int>
1 AAACAACGAATAGTTC-1 FALSE 0 16 section1 2312
2 AAACAAGTATCTCCCA-1 TRUE 50 102 section1 8230
3 AAACAATCTACTAGCA-1 TRUE 3 43 section1 4170
4 AAACACCAATAACTGC-1 TRUE 59 19 section1 2519
5 AAACAGAGCGACTCCT-1 TRUE 14 94 section1 7679
6 AAACAGCTTTCAGAAG-1 FALSE 43 9 section1 1831
7 AAACAGGGTCTATATT-1 FALSE 47 13 section1 2106
8 AAACAGTGTTCCTGGG-1 FALSE 73 43 section1 4170
9 AAACATGGTGAGAGGA-1 FALSE 62 0 section1 1212
10 AAACATTTCCCGGATT-1 FALSE 61 97 section1 7886
# ℹ 89 more rows
# ℹ 1 more variable: pxl_row_in_fullres <int>
rd10xV> # base directory 'outs/' from Space Ranger can also be omitted
rd10xV> samples2 <- file.path(dir, sample_ids)
rd10xV> (spe2 <- read10xVisium(samples2, sample_ids,
rd10xV+ type = "sparse", data = "raw",
rd10xV+ images = "lowres", load = FALSE))
# A SpatialExperiment-tibble abstraction: 99 × 7
# Features = 50 | Cells = 99 | Assays = counts
.cell in_tissue array_row array_col sample_id pxl_col_in_fullres
<chr> <lgl> <int> <int> <chr> <int>
1 AAACAACGAATAGTTC-1 FALSE 0 16 section1 2312
2 AAACAAGTATCTCCCA-1 TRUE 50 102 section1 8230
3 AAACAATCTACTAGCA-1 TRUE 3 43 section1 4170
4 AAACACCAATAACTGC-1 TRUE 59 19 section1 2519
5 AAACAGAGCGACTCCT-1 TRUE 14 94 section1 7679
6 AAACAGCTTTCAGAAG-1 FALSE 43 9 section1 1831
7 AAACAGGGTCTATATT-1 FALSE 47 13 section1 2106
8 AAACAGTGTTCCTGGG-1 FALSE 73 43 section1 4170
9 AAACATGGTGAGAGGA-1 FALSE 62 0 section1 1212
10 AAACATTTCCCGGATT-1 FALSE 61 97 section1 7886
# ℹ 89 more rows
# ℹ 1 more variable: pxl_row_in_fullres <int>
rd10xV> # tabulate number of spots mapped to tissue
rd10xV> cd <- colData(spe)
rd10xV> table(
rd10xV+ in_tissue = cd$in_tissue,
rd10xV+ sample_id = cd$sample_id)
sample_id
in_tissue section1 section2
FALSE 28 27
TRUE 22 22
rd10xV> # view available images
rd10xV> imgData(spe)
DataFrame with 2 rows and 4 columns
sample_id image_id data scaleFactor
<character> <character> <list> <numeric>
1 section1 lowres #### 0.0510334
2 section2 lowres #### 0.0510334
[ FAIL 0 | WARN 3 | SKIP 0 | PASS 39 ]
[ FAIL 0 | WARN 3 | SKIP 0 | PASS 39 ]
>
> proc.time()
user system elapsed
41.845 1.617 44.105
tidySpatialExperiment.Rcheck/tidySpatialExperiment-Ex.timings
| name | user | system | elapsed | |
| aggregate_cells | 8.230 | 0.277 | 8.814 | |
| arrange | 3.995 | 0.120 | 4.224 | |
| as_tibble | 2.941 | 0.152 | 3.135 | |
| bind_cols | 3.185 | 0.042 | 3.324 | |
| bind_rows | 3.187 | 0.044 | 3.264 | |
| count | 3.183 | 0.043 | 3.461 | |
| distinct | 2.921 | 0.046 | 3.232 | |
| ellipse | 3.027 | 0.047 | 3.220 | |
| extract | 3.114 | 0.066 | 3.573 | |
| filter | 3.163 | 0.077 | 3.576 | |
| formatting | 2.971 | 0.072 | 3.340 | |
| gate | 3.319 | 0.073 | 3.724 | |
| gate_interactive | 2.795 | 0.067 | 3.181 | |
| gate_programmatic | 3.287 | 0.067 | 3.688 | |
| ggplot | 3.336 | 0.049 | 3.628 | |
| glimpse | 2.797 | 0.041 | 2.946 | |
| group_by | 2.914 | 0.035 | 3.039 | |
| inner_join | 3.339 | 0.035 | 3.457 | |
| join_features | 3.150 | 0.038 | 3.331 | |
| left_join | 3.383 | 0.062 | 3.713 | |
| mutate | 3.113 | 0.079 | 3.576 | |
| nest | 3.110 | 0.083 | 3.566 | |
| pivot_longer | 2.947 | 0.069 | 3.272 | |
| plot_ly | 3.028 | 0.159 | 3.455 | |
| pull | 2.893 | 0.059 | 3.083 | |
| rectangle | 3.035 | 0.039 | 3.120 | |
| rename | 3.342 | 0.048 | 3.999 | |
| right_join | 3.381 | 0.051 | 3.483 | |
| rowwise | 2.956 | 0.043 | 3.036 | |
| sample_n | 3.445 | 0.039 | 3.500 | |
| select | 2.940 | 0.047 | 3.079 | |
| separate | 3.080 | 0.040 | 3.132 | |
| slice | 2.995 | 0.035 | 3.040 | |
| summarise | 2.904 | 0.055 | 2.968 | |
| tbl_format_header | 0.000 | 0.001 | 0.001 | |
| unite | 3.012 | 0.073 | 3.092 | |
| unnest | 3.310 | 0.039 | 3.359 | |