##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data pareg
###
##############################################################################
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* checking for file ‘pareg/DESCRIPTION’ ... OK
* preparing ‘pareg’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘pareg.Rmd’ using rmarkdown
Channels:
 - anaconda
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done

## Package Plan ##

  environment location: /home/biocbuild/.cache/R/basilisk/1.20.0/pareg/1.12.0/pareg

  added / updated specs:
    - python=3.12.8


The following NEW packages will be INSTALLED:

  _libgcc_mutex      anaconda/linux-aarch64::_libgcc_mutex-0.1-main 
  _openmp_mutex      anaconda/linux-aarch64::_openmp_mutex-5.1-51_gnu 
  bzip2              anaconda/linux-aarch64::bzip2-1.0.8-h998d150_6 
  ca-certificates    anaconda/linux-aarch64::ca-certificates-2025.9.9-hd43f75c_0 
  expat              anaconda/linux-aarch64::expat-2.7.1-h419075a_0 
  ld_impl_linux-aar~ anaconda/linux-aarch64::ld_impl_linux-aarch64-2.44-h4e4ac68_2 
  libffi             anaconda/linux-aarch64::libffi-3.4.4-h419075a_1 
  libgcc-ng          anaconda/linux-aarch64::libgcc-ng-11.2.0-h1234567_1 
  libgomp            anaconda/linux-aarch64::libgomp-11.2.0-h1234567_1 
  libstdcxx-ng       anaconda/linux-aarch64::libstdcxx-ng-11.2.0-h1234567_1 
  libuuid            anaconda/linux-aarch64::libuuid-1.41.5-h998d150_0 
  libxcb             anaconda/linux-aarch64::libxcb-1.17.0-hf66535e_0 
  ncurses            anaconda/linux-aarch64::ncurses-6.5-h419075a_0 
  openssl            anaconda/linux-aarch64::openssl-3.0.18-h8a9c3cf_0 
  pip                anaconda/noarch::pip-25.2-pyhc872135_0 
  pthread-stubs      anaconda/linux-aarch64::pthread-stubs-0.3-hfd63f10_1 
  python             anaconda/linux-aarch64::python-3.12.8-h8edadfe_0 
  readline           anaconda/linux-aarch64::readline-8.3-h886d1d0_0 
  setuptools         anaconda/linux-aarch64::setuptools-80.9.0-py312hd43f75c_0 
  sqlite             anaconda/linux-aarch64::sqlite-3.50.2-h998d150_1 
  tk                 anaconda/linux-aarch64::tk-8.6.15-h987d8db_0 
  tzdata             anaconda/noarch::tzdata-2025b-h04d1e81_0 
  wheel              anaconda/linux-aarch64::wheel-0.45.1-py312hd43f75c_0 
  xorg-libx11        anaconda/linux-aarch64::xorg-libx11-1.8.12-hf66535e_1 
  xorg-libxau        anaconda/linux-aarch64::xorg-libxau-1.0.12-hf66535e_0 
  xorg-libxdmcp      anaconda/linux-aarch64::xorg-libxdmcp-1.1.5-hf66535e_0 
  xorg-xorgproto     anaconda/linux-aarch64::xorg-xorgproto-2024.1-h998d150_1 
  xz                 anaconda/linux-aarch64::xz-5.6.4-h998d150_1 
  zlib               anaconda/linux-aarch64::zlib-1.2.13-h6185dc7_2 


Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Channels:
 - anaconda
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done

# All requested packages already installed.

Channels:
 - anaconda
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... failed

LibMambaUnsatisfiableError: Encountered problems while solving:
  - package tensorflow-base-2.10.0-eigen_py37ha372be2_0 requires python >=3.7,<3.8.0a0, but none of the providers can be installed

Could not solve for environment specs
The following packages are incompatible
├─ python 3.12.8**  is requested and can be installed;
└─ tensorflow 2.10.0**  is not installable because there are no viable options
   ├─ tensorflow 2.10.0 would require
   │  └─ tensorflow-base [2.10.0 eigen_py37ha372be2_0|2.10.0 mkl_py37hfdbf31d_0], which requires
   │     └─ python >=3.7,<3.8.0a0 , which conflicts with any installable versions previously reported;
   ├─ tensorflow 2.10.0 would require
   │  └─ tensorflow-base [2.10.0 eigen_py310ha372be2_0|2.10.0 mkl_py310hfdbf31d_0], which requires
   │     └─ python >=3.10,<3.11.0a0 , which conflicts with any installable versions previously reported;
   ├─ tensorflow 2.10.0 would require
   │  └─ tensorflow-base [2.10.0 eigen_py38ha372be2_0|2.10.0 mkl_py38hfdbf31d_0], which requires
   │     └─ python >=3.8,<3.9.0a0 , which conflicts with any installable versions previously reported;
   └─ tensorflow 2.10.0 would require
      └─ tensorflow-base [2.10.0 eigen_py39ha372be2_0|2.10.0 mkl_py39hfdbf31d_0], which requires
         └─ python >=3.9,<3.10.0a0 , which conflicts with any installable versions previously reported.


Quitting from pareg.Rmd:144-150 [unnamed-chunk-9]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! one or more Python packages failed to install [error code 1]
---
Backtrace:
    ▆
 1. └─pareg::pareg(...)
 2.   └─basilisk::basiliskStart(...)
 3.     └─basilisk::obtainEnvironmentPath(env)
 4.       └─basilisk::setupBasiliskEnv(...)
 5.         └─reticulate::conda_install(...)
 6.           └─reticulate:::stopf(fmt, result)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'pareg.Rmd' failed with diagnostics:
one or more Python packages failed to install [error code 1]
--- failed re-building ‘pareg.Rmd’

--- re-building ‘pathway_similarities.Rmd’ using rmarkdown
--- finished re-building ‘pathway_similarities.Rmd’

SUMMARY: processing the following file failed:
  ‘pareg.Rmd’

Error: Vignette re-building failed.
Execution halted