Multiple platform build/check report for BioC 3.21 - CHECK results for graper on nebbiolo1

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 24.04.3 LTS)	x86_64	4.5.1 (2025-06-13) -- "Great Square Root"	4833
merida1	macOS 12.7.6 Monterey	x86_64	4.5.1 RC (2025-06-05 r88288) -- "Great Square Root"	4614
kjohnson1	macOS 13.7.5 Ventura	arm64	4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root"	4555
kunpeng2	Linux (openEuler 24.03 LTS)	aarch64	R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences"	4586
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

CHECK results for graper on nebbiolo1

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: graper

Version: 1.24.2

Command: /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.21-bioc/R/site-library --timings graper_1.24.2.tar.gz

StartedAt: 2025-10-15 23:51:21 -0400 (Wed, 15 Oct 2025)

EndedAt: 2025-10-15 23:52:52 -0400 (Wed, 15 Oct 2025)

EllapsedTime: 91.1 seconds

RetCode: 0

Status: OK

CheckDir: graper.Rcheck

Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.21-bioc/R/site-library --timings graper_1.24.2.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.21-bioc/meat/graper.Rcheck’
* using R version 4.5.1 (2025-06-13)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
    GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.24.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  ‘/home/biocbuild/bbs-3.21-bioc/meat/graper.Rcheck/00check.log’
for details.

Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.21-bioc/R/site-library’
* installing *source* package ‘graper’ ...
** this is package ‘graper’ version ‘1.24.2’
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.21-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.21-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.21-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.21-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall -Werror=format-security  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.21-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.21-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.21-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.21-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall -Werror=format-security  -c fit_graper.cpp -o fit_graper.o
g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.21-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.21-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.21-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.21-bioc/R/site-library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.5.1 (2025-06-13) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-867.308
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-568.808
ELB improved by 298.5

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-512.123
ELB improved by 56.685

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-477.534
ELB improved by 34.5899

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.596
ELB improved by 14.938

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.254
ELB improved by 6.34143

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.24
ELB improved by 4.01385

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.753
ELB improved by 3.4874

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.311
ELB improved by 3.44213

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.798
ELB improved by 3.51279

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.29
ELB improved by 3.50747

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.034
ELB improved by 3.2568

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.337
ELB improved by 2.69697

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.362
ELB improved by 1.97512

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.034
ELB improved by 1.3274

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.165
ELB improved by 0.868781

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.585
ELB improved by 0.579969

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.183
ELB improved by 0.402195

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.892
ELB improved by 0.290973

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.672
ELB improved by 0.220467

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.497
ELB improved by 0.175228

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.351
ELB improved by 0.145413

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.226
ELB improved by 0.124899

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.116
ELB improved by 0.11007

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.017
ELB improved by 0.0988491

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.927
ELB improved by 0.0900441

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.844
ELB improved by 0.0829487

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.767
ELB improved by 0.0771279

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.695
ELB improved by 0.0723006

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.627
ELB improved by 0.0682762

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.562
ELB improved by 0.06492

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.5
ELB improved by 0.0621333

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.44
ELB improved by 0.0598424

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.382
ELB improved by 0.0579911

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.325
ELB improved by 0.0565362

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.27
ELB improved by 0.0554449

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.215
ELB improved by 0.0546917

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.161
ELB improved by 0.0542571

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.107
ELB improved by 0.0541254

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.052
ELB improved by 0.0542823

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.998
ELB improved by 0.0547133

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.942
ELB improved by 0.0554

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.886
ELB improved by 0.0563184

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.829
ELB improved by 0.0574358

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.77
ELB improved by 0.0587098

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.71
ELB improved by 0.0600891

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.648
ELB improved by 0.061516

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.585
ELB improved by 0.0629307

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.521
ELB improved by 0.0642765

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.455
ELB improved by 0.0655034

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.389
ELB improved by 0.0665706

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.321
ELB improved by 0.0674461

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.253
ELB improved by 0.0681065

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.185
ELB improved by 0.0685361

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.116
ELB improved by 0.068727

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.047
ELB improved by 0.0686794

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.979
ELB improved by 0.0684016

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.911
ELB improved by 0.0679105

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.844
ELB improved by 0.0672302

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.777
ELB improved by 0.0663906

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.712
ELB improved by 0.0654255

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.648
ELB improved by 0.0643701

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.584
ELB improved by 0.0632589

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.522
ELB improved by 0.0621234

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.461
ELB improved by 0.060991

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.401
ELB improved by 0.0598838

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.343
ELB improved by 0.0588178

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.285
ELB improved by 0.0578031

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.228
ELB improved by 0.056844

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.172
ELB improved by 0.0559398

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.117
ELB improved by 0.0550853

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.063
ELB improved by 0.0542719

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.009
ELB improved by 0.0534884

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.956
ELB improved by 0.052722

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.905
ELB improved by 0.051959

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.853
ELB improved by 0.051186

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.803
ELB improved by 0.05039

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.753
ELB improved by 0.0495601

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.705
ELB improved by 0.048687

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.657
ELB improved by 0.0477643

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.61
ELB improved by 0.0467885

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.564
ELB improved by 0.0457594

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.52
ELB improved by 0.0446803

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.476
ELB improved by 0.0435582

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.434
ELB improved by 0.042404

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.392
ELB improved by 0.0412326

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.352
ELB improved by 0.0400635

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.314
ELB improved by 0.038922

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.276
ELB improved by 0.0378412

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.239
ELB improved by 0.0368656

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.203
ELB improved by 0.0360584

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.167
ELB improved by 0.0355134

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.132
ELB improved by 0.0353784

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.096
ELB improved by 0.0358985

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.058
ELB improved by 0.0374993

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.018
ELB improved by 0.0409451

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.97
ELB improved by 0.0476295

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.91
ELB improved by 0.0600207

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.828
ELB improved by 0.0819325

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.711
ELB improved by 0.11684

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.551
ELB improved by 0.16036

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.359
ELB improved by 0.191466

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.168
ELB improved by 0.190763

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.996
ELB improved by 0.172531

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.831
ELB improved by 0.164638

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.651
ELB improved by 0.180162

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.433
ELB improved by 0.218461

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.173
ELB improved by 0.259373

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.906
ELB improved by 0.267567

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.664
ELB improved by 0.241683

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.446
ELB improved by 0.217959

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.219
ELB improved by 0.226932

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.929
ELB improved by 0.290598

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.531
ELB improved by 0.397662

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.096
ELB improved by 0.435016

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.756
ELB improved by 0.339987

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.541
ELB improved by 0.215019

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.411
ELB improved by 0.129963

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.329
ELB improved by 0.0818342

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.275
ELB improved by 0.0545845

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.236
ELB improved by 0.0386087

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.207
ELB improved by 0.0290568

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.184
ELB improved by 0.0233333

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.164
ELB improved by 0.0199206

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.146
ELB improved by 0.0178603

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.129
ELB improved by 0.0165087

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.114
ELB improved by 0.015423

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.1
ELB improved by 0.0143192

iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.086
ELB improved by 0.0130599

iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.075
ELB improved by 0.0116375

iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.065
ELB improved by 0.0101334

iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.056
ELB improved by 0.00866234

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-861.779
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-588.543
ELB improved by 273.237

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-529.176
ELB improved by 59.3672

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-484.408
ELB improved by 44.768

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.966
ELB improved by 21.4416

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.766
ELB improved by 9.19981

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.924
ELB improved by 5.84268

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.523
ELB improved by 5.40109

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.43
ELB improved by 6.09227

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.346
ELB improved by 7.08424

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.843
ELB improved by 7.50331

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.233
ELB improved by 6.61023

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.397
ELB improved by 4.83546

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.187
ELB improved by 3.21053

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.007
ELB improved by 2.17991

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.362
ELB improved by 1.64447

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.015
ELB improved by 1.347

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.929
ELB improved by 1.08613

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.046
ELB improved by 0.883475

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.274
ELB improved by 0.771169

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.556
ELB improved by 0.718012

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.864
ELB improved by 0.692793

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.185
ELB improved by 0.678827

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.516
ELB improved by 0.669147

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.854
ELB improved by 0.661981

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.195
ELB improved by 0.65814

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.536
ELB improved by 0.659496

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.868
ELB improved by 0.668038

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.183
ELB improved by 0.685306

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.47
ELB improved by 0.712227

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.721
ELB improved by 0.749891

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.918
ELB improved by 0.802882

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.029
ELB improved by 0.888252

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.984
ELB improved by 1.04492

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.736
ELB improved by 1.24861

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.515
ELB improved by 1.22119

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.565
ELB improved by 0.94963

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.864
ELB improved by 0.700931

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.339
ELB improved by 0.524651

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.936
ELB improved by 0.403387

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.616
ELB improved by 0.320555

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.353
ELB improved by 0.262173

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.136
ELB improved by 0.217653

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.954
ELB improved by 0.181878

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.799
ELB improved by 0.15523

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.659
ELB improved by 0.139952

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.521
ELB improved by 0.137565

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.371
ELB improved by 0.150109

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.187
ELB improved by 0.183876

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.934
ELB improved by 0.253075

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.575
ELB improved by 0.35909

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.153
ELB improved by 0.421724

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.767
ELB improved by 0.385839

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.42
ELB improved by 0.347833

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.089
ELB improved by 0.330508

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.779
ELB improved by 0.310333

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.467
ELB improved by 0.311376

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.115
ELB improved by 0.35253

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.76
ELB improved by 0.354394

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.511
ELB improved by 0.248899

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.375
ELB improved by 0.136243

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.301
ELB improved by 0.0746721

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.255
ELB improved by 0.0460444

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.222
ELB improved by 0.0322208

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.197
ELB improved by 0.0248984

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.177
ELB improved by 0.0205941

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.159
ELB improved by 0.0178199

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.143
ELB improved by 0.015916

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.128
ELB improved by 0.0145803

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.115
ELB improved by 0.0136764

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.102
ELB improved by 0.0131563

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.089
ELB improved by 0.0130322

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.075
ELB improved by 0.0133698

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.061
ELB improved by 0.014292

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.045
ELB improved by 0.0159773

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.026
ELB improved by 0.0186234

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.004
ELB improved by 0.0223123

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.977
ELB improved by 0.0267108

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.947
ELB improved by 0.0307122

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.914
ELB improved by 0.0325863

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.883
ELB improved by 0.0311979

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.856
ELB improved by 0.0272553

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.833
ELB improved by 0.0226762

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.814
ELB improved by 0.0188579

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.798
ELB improved by 0.016079

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.784
ELB improved by 0.0140263

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.772
ELB improved by 0.0123362

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.761
ELB improved by 0.0107916

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.751
ELB improved by 0.00932128

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-889.311
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-555.335
ELB improved by 333.976

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-496.836
ELB improved by 58.4989

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.25
ELB improved by 30.5858

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.286
ELB improved by 10.965

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.266
ELB improved by 5.01906

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.864
ELB improved by 3.40267

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.963
ELB improved by 2.90034

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.176
ELB improved by 2.78698

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.32
ELB improved by 2.85609

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.289
ELB improved by 3.03171

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.017
ELB improved by 3.2716

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.5
ELB improved by 3.51739

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.841
ELB improved by 3.65902

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.277
ELB improved by 3.5638

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.092
ELB improved by 3.18503

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.47
ELB improved by 2.62171

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.439
ELB improved by 2.03078

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.925
ELB improved by 1.51462

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.811
ELB improved by 1.11351

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.978
ELB improved by 0.83302

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.327
ELB improved by 0.651675

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.787
ELB improved by 0.53905

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.317
ELB improved by 0.470485

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.887
ELB improved by 0.4298

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.48
ELB improved by 0.407211

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.083
ELB improved by 0.396856

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.688
ELB improved by 0.394847

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.29
ELB improved by 0.398043

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.886
ELB improved by 0.40392

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.475
ELB improved by 0.4114

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.054
ELB improved by 0.421334

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.618
ELB improved by 0.435718

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.161
ELB improved by 0.456484

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.676
ELB improved by 0.484944

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.155
ELB improved by 0.521863

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.587
ELB improved by 0.567739

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.964
ELB improved by 0.623281

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.273
ELB improved by 0.690355

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.499
ELB improved by 0.773734

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.62
ELB improved by 0.879423

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.639
ELB improved by 0.980747

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.674
ELB improved by 0.965181

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.878
ELB improved by 0.795809

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.282
ELB improved by 0.596775

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.841
ELB improved by 0.440138

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.512
ELB improved by 0.329075

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.261
ELB improved by 0.251629

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.064
ELB improved by 0.197046

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.906
ELB improved by 0.157868

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.777
ELB improved by 0.129205

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.669
ELB improved by 0.107818

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.577
ELB improved by 0.0914843

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.499
ELB improved by 0.0786171

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.431
ELB improved by 0.0680775

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.371
ELB improved by 0.0590794

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.32
ELB improved by 0.0511383

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.276
ELB improved by 0.0440158

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.239
ELB improved by 0.0376415

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.207
ELB improved by 0.0320241

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.179
ELB improved by 0.0271781

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.156
ELB improved by 0.0230844

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.137
ELB improved by 0.0196838

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.12
ELB improved by 0.0168896

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.105
ELB improved by 0.0146054

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.092
ELB improved by 0.0127383

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.081
ELB improved by 0.0112069

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.071
ELB improved by 0.00994356

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-871.339
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-566.751
ELB improved by 304.587

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-509.058
ELB improved by 57.693

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-473.34
ELB improved by 35.7184

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.547
ELB improved by 15.7933

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.598
ELB improved by 6.94838

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.571
ELB improved by 5.02746

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.908
ELB improved by 4.6631

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.273
ELB improved by 4.63477

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.527
ELB improved by 4.74553

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.628
ELB improved by 4.89921

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.683
ELB improved by 4.94526

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.057
ELB improved by 4.62607

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.324
ELB improved by 3.73317

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.784
ELB improved by 2.53993

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.231
ELB improved by 1.55313

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.291
ELB improved by 0.940163

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.687
ELB improved by 0.603186

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.268
ELB improved by 0.419203

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.955
ELB improved by 0.313078

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.708
ELB improved by 0.246915

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.506
ELB improved by 0.202407

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.335
ELB improved by 0.170543

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.189
ELB improved by 0.146645

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.06
ELB improved by 0.128112

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.947
ELB improved by 0.113386

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.846
ELB improved by 0.101467

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.754
ELB improved by 0.0916817

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.67
ELB improved by 0.083553

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.594
ELB improved by 0.0767328

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.523
ELB improved by 0.0709598

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.457
ELB improved by 0.0660338

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.395
ELB improved by 0.0617988

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.337
ELB improved by 0.0581313

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.282
ELB improved by 0.0549324

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.23
ELB improved by 0.0521223

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.18
ELB improved by 0.0496358

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.133
ELB improved by 0.0474193

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.087
ELB improved by 0.0454285

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.044
ELB improved by 0.0436265

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.002
ELB improved by 0.0419828

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.961
ELB improved by 0.0404715

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.922
ELB improved by 0.0390714

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.884
ELB improved by 0.0377645

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.848
ELB improved by 0.0365357

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.812
ELB improved by 0.0353729

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.778
ELB improved by 0.0342657

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.745
ELB improved by 0.0332057

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.713
ELB improved by 0.0321863

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.681
ELB improved by 0.0312019

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.651
ELB improved by 0.0302484

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.622
ELB improved by 0.0293223

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.593
ELB improved by 0.0284213

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.566
ELB improved by 0.0275436

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.539
ELB improved by 0.026688

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.513
ELB improved by 0.0258536

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.488
ELB improved by 0.02504

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.464
ELB improved by 0.0242471

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.441
ELB improved by 0.023475

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.418
ELB improved by 0.0227238

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.396
ELB improved by 0.0219937

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.375
ELB improved by 0.0212851

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.354
ELB improved by 0.0205984

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.334
ELB improved by 0.0199337

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.315
ELB improved by 0.0192913

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.296
ELB improved by 0.0186714

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.278
ELB improved by 0.0180742

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.261
ELB improved by 0.0174998

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.244
ELB improved by 0.016948

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.227
ELB improved by 0.0164188

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.211
ELB improved by 0.0159121

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.196
ELB improved by 0.0154275

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.181
ELB improved by 0.0149649

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.166
ELB improved by 0.0145237

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.152
ELB improved by 0.0141037

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.139
ELB improved by 0.0137044

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.125
ELB improved by 0.0133253

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.112
ELB improved by 0.0129658

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.1
ELB improved by 0.0126254

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.087
ELB improved by 0.0123035

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.075
ELB improved by 0.0119996

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.064
ELB improved by 0.011713

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.052
ELB improved by 0.0114433

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.041
ELB improved by 0.0111897

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.03
ELB improved by 0.0109518

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.019
ELB improved by 0.0107289

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.009
ELB improved by 0.0105205

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.998
ELB improved by 0.0103261

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.988
ELB improved by 0.0101452

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.978
ELB improved by 0.00997723

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  2.202   0.182   2.372

Example timings

graper.Rcheck/graper-Ex.timings

name	user	system	elapsed
coef.graper	0.058	0.013	0.071
getPIPs	0.049	0.014	0.063
graper	0.085	0.015	0.100
makeExampleData	0.010	0.001	0.010
makeExampleDataWithUnequalGroups	0.012	0.001	0.013
plotELBO	0.340	0.014	0.355
plotGroupPenalties	1.123	0.056	1.178
plotPosterior	0.647	0.014	0.662
predict.graper	2.068	0.078	2.145
print.graper	0.050	0.014	0.063