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This page was generated on 2025-02-18 11:41 -0500 (Tue, 18 Feb 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 4720
palomino7Windows Server 2022 Datacenterx64R Under development (unstable) (2025-01-21 r87610 ucrt) -- "Unsuffered Consequences" 4482
lconwaymacOS 12.7.1 Montereyx86_64R Under development (unstable) (2025-01-22 r87618) -- "Unsuffered Consequences" 4493
kjohnson3macOS 13.7.1 Venturaarm64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 4446
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1248/2295HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MGFR 1.33.0  (landing page)
Khadija El Amrani
Snapshot Date: 2025-02-17 13:40 -0500 (Mon, 17 Feb 2025)
git_url: https://git.bioconductor.org/packages/MGFR
git_branch: devel
git_last_commit: 3887a1b
git_last_commit_date: 2024-10-29 10:12:09 -0500 (Tue, 29 Oct 2024)
nebbiolo1Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    ERROR  
palomino7Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
lconwaymacOS 12.7.1 Monterey / x86_64  OK    ERROR  skippedskipped
kjohnson3macOS 13.7.1 Ventura / arm64  OK    OK    ERROR    OK  

BUILD results for MGFR on palomino7

To the developers/maintainers of the MGFR package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MGFR.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: MGFR
Version: 1.33.0
Command: chmod a+r MGFR -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data MGFR
StartedAt: 2025-02-17 19:47:15 -0500 (Mon, 17 Feb 2025)
EndedAt: 2025-02-17 19:48:23 -0500 (Mon, 17 Feb 2025)
EllapsedTime: 67.6 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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###
### Running command:
###
###   chmod a+r MGFR -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data MGFR
###
##############################################################################
##############################################################################


* checking for file 'MGFR/DESCRIPTION' ... OK
* preparing 'MGFR':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'MGFR.Rnw' using Sweave
Warning: Ensembl will soon enforce the use of https.
Ensure the 'host' argument includes "https://"

Error: processing vignette 'MGFR.Rnw' failed with diagnostics:
 chunk 4 (label = reference) 
Error in checkDataset(dataset = dataset, mart = mart) : 
  The given dataset:  hsapiens_gene_ensembl , is not valid.  Correct dataset names can be obtained with the listDatasets() function.

--- failed re-building 'MGFR.Rnw'

SUMMARY: processing the following file failed:
  'MGFR.Rnw'

Error: Vignette re-building failed.
Execution halted