Lori Shepherd
| Snapshot Date: 2025-10-09 13:40 -0400 (Thu, 09 Oct 2025) |
| git_url: https://git.bioconductor.org/packages/BiocFileCache |
| git_branch: RELEASE_3_21 |
| git_last_commit: 22fec96 |
| git_last_commit_date: 2025-08-25 08:44:02 -0400 (Mon, 25 Aug 2025) |
| Back to Multiple platform build/check report for BioC 3.21: simplified long |
|
This page was generated on 2025-10-13 11:38 -0400 (Mon, 13 Oct 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4833 |
| merida1 | macOS 12.7.5 Monterey | x86_64 | 4.5.1 RC (2025-06-05 r88288) -- "Great Square Root" | 4614 |
| kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4555 |
| kunpeng2 | Linux (openEuler 24.03 LTS) | aarch64 | R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" | 4586 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 185/2341 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| BiocFileCache 2.16.2 (landing page) Lori Shepherd
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.5 Monterey / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| kunpeng2 | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the BiocFileCache package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/BiocFileCache.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: BiocFileCache |
| Version: 2.16.2 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data BiocFileCache |
| StartedAt: 2025-10-09 17:22:09 -0400 (Thu, 09 Oct 2025) |
| EndedAt: 2025-10-09 17:23:54 -0400 (Thu, 09 Oct 2025) |
| EllapsedTime: 105.4 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
##############################################################################
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### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data BiocFileCache
###
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* checking for file ‘BiocFileCache/DESCRIPTION’ ... OK
* preparing ‘BiocFileCache’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘BiocFileCache.Rmd’ using rmarkdown
Quitting from BiocFileCache.Rmd:206-221 [bfcaddremote]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `.util_download()`:
! bfcadd() failed; see warnings()
---
Backtrace:
▆
1. ├─BiocFileCache::bfcadd(bfc, "TestWeb", fpath = url)
2. └─BiocFileCache::bfcadd(bfc, "TestWeb", fpath = url)
3. └─BiocFileCache:::.util_download(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'BiocFileCache.Rmd' failed with diagnostics:
bfcadd() failed; see warnings()
--- failed re-building ‘BiocFileCache.Rmd’
--- re-building ‘BiocFileCache_Troubleshooting.Rmd’ using rmarkdown
--- finished re-building ‘BiocFileCache_Troubleshooting.Rmd’
--- re-building ‘BiocFileCache_UseCases.Rmd’ using rmarkdown
--- finished re-building ‘BiocFileCache_UseCases.Rmd’
SUMMARY: processing the following file failed:
‘BiocFileCache.Rmd’
Error: Vignette re-building failed.
Execution halted