Back to Multiple platform build/check report for BioC 3.20:   simplified   long
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This page was generated on 2025-03-10 12:12 -0400 (Mon, 10 Mar 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.1 LTS)x86_644.4.3 (2025-02-28) -- "Trophy Case" 4670
palomino8Windows Server 2022 Datacenterx644.4.3 (2025-02-28 ucrt) -- "Trophy Case" 4355
merida1macOS 12.7.5 Montereyx86_644.4.3 (2025-02-28) -- "Trophy Case" 4446
kjohnson1macOS 13.6.6 Venturaarm644.4.3 (2025-02-28) -- "Trophy Case" 4439
taishanLinux (openEuler 24.03 LTS)aarch644.4.3 (2025-02-28) -- "Trophy Case" 4306
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1020/2289HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
immApex 1.0.5  (landing page)
Nick Borcherding
Snapshot Date: 2025-03-06 13:00 -0500 (Thu, 06 Mar 2025)
git_url: https://git.bioconductor.org/packages/immApex
git_branch: RELEASE_3_20
git_last_commit: 496f735
git_last_commit_date: 2025-02-25 09:19:26 -0500 (Tue, 25 Feb 2025)
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    ERROR    OK  
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
taishanLinux (openEuler 24.03 LTS) / aarch64  OK    OK    OK  


CHECK results for immApex on taishan

To the developers/maintainers of the immApex package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/immApex.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.
- See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host.

raw results


Summary

Package: immApex
Version: 1.0.5
Command: /home/biocbuild/R/R/bin/R CMD check --install=check:immApex.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings immApex_1.0.5.tar.gz
StartedAt: 2025-03-07 07:54:31 -0000 (Fri, 07 Mar 2025)
EndedAt: 2025-03-07 08:02:40 -0000 (Fri, 07 Mar 2025)
EllapsedTime: 489.5 seconds
RetCode: 0
Status:   OK  
CheckDir: immApex.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R/bin/R CMD check --install=check:immApex.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings immApex_1.0.5.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.20-bioc/meat/immApex.Rcheck’
* using R version 4.4.3 (2025-02-28)
* using platform: aarch64-unknown-linux-gnu
* R was compiled by
    aarch64-unknown-linux-gnu-gcc (GCC) 14.2.0
    GNU Fortran (GCC) 14.2.0
* running under: openEuler 24.03 (LTS)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘immApex/DESCRIPTION’ ... OK
* this is package ‘immApex’ version ‘1.0.5’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘immApex’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
                       user system elapsed
variationalSequences 11.717  1.170  13.024
sequenceDecoder      10.506  1.137  11.768
propertyEncoder       9.622  0.940  10.672
onehotEncoder         8.655  0.912   9.733
getIMGT               0.676  0.008   5.246
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘spelling.R’
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: OK


Installation output

immApex.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R/bin/R CMD INSTALL immApex
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/R/R-4.4.3/site-library’
* installing *source* package ‘immApex’ ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (immApex)

Tests output

immApex.Rcheck/tests/spelling.Rout


R version 4.4.3 (2025-02-28) -- "Trophy Case"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: aarch64-unknown-linux-gnu

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> if(requireNamespace('spelling', quietly = TRUE))
+   spelling::spell_check_test(vignettes = TRUE, error = FALSE,
+                              skip_on_cran = TRUE)
NULL
> 
> proc.time()
   user  system elapsed 
  0.191   0.031   0.207 

immApex.Rcheck/tests/testthat.Rout


R version 4.4.3 (2025-02-28) -- "Trophy Case"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: aarch64-unknown-linux-gnu

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
> 
> library(testthat)
> library(immApex)
> 
> test_check("immApex")
  × No solution found when resolving `--with` dependencies:
  ╰─▶ Because only the following versions of tensorflow-cpu are available:
          tensorflow-cpu==1.15.0
          tensorflow-cpu==2.1.0
          tensorflow-cpu==2.1.1
          tensorflow-cpu==2.1.2
          tensorflow-cpu==2.1.3
          tensorflow-cpu==2.1.4
          tensorflow-cpu==2.2.0
          tensorflow-cpu==2.2.1
          tensorflow-cpu==2.2.2
          tensorflow-cpu==2.2.3
          tensorflow-cpu==2.3.0
          tensorflow-cpu==2.3.1
          tensorflow-cpu==2.3.2
          tensorflow-cpu==2.3.3
          tensorflow-cpu==2.3.4
          tensorflow-cpu==2.4.0
          tensorflow-cpu==2.4.1
          tensorflow-cpu==2.4.2
          tensorflow-cpu==2.4.3
          tensorflow-cpu==2.4.4
          tensorflow-cpu==2.5.0
          tensorflow-cpu==2.5.1
          tensorflow-cpu==2.5.2
          tensorflow-cpu==2.5.3
          tensorflow-cpu==2.6.0
          tensorflow-cpu==2.6.1
          tensorflow-cpu==2.6.2
          tensorflow-cpu==2.6.3
          tensorflow-cpu==2.6.4
          tensorflow-cpu==2.6.5
          tensorflow-cpu==2.7.0
          tensorflow-cpu==2.7.1
          tensorflow-cpu==2.7.2
          tensorflow-cpu==2.7.3
          tensorflow-cpu==2.7.4
          tensorflow-cpu==2.8.0
          tensorflow-cpu==2.8.1
          tensorflow-cpu==2.8.2
          tensorflow-cpu==2.8.3
          tensorflow-cpu==2.8.4
          tensorflow-cpu==2.9.0
          tensorflow-cpu==2.9.1
          tensorflow-cpu==2.9.2
          tensorflow-cpu==2.9.3
          tensorflow-cpu==2.10.0
          tensorflow-cpu==2.10.1
          tensorflow-cpu==2.11.0
          tensorflow-cpu==2.11.1
          tensorflow-cpu==2.12.0
          tensorflow-cpu==2.12.1
          tensorflow-cpu==2.13.0
          tensorflow-cpu==2.13.1
          tensorflow-cpu==2.14.0
          tensorflow-cpu==2.14.1
          tensorflow-cpu==2.15.0
          tensorflow-cpu==2.15.0.post1
          tensorflow-cpu==2.15.1
          tensorflow-cpu==2.16.1
          tensorflow-cpu==2.16.2
          tensorflow-cpu==2.17.0
          tensorflow-cpu==2.17.1
          tensorflow-cpu==2.18.0
      and tensorflow-cpu<=2.11.1 has no wheels with a matching Python ABI
      tag (e.g., `cp311`), we can conclude that tensorflow-cpu<=2.11.1 cannot
      be used.
      And because tensorflow-cpu>=2.12.0 has no wheels with a matching
      platform tag (e.g., `manylinux_2_38_aarch64`) and you require
      tensorflow-cpu, we can conclude that your requirements are
      unsatisfiable.

      hint: Pre-releases are available for `tensorflow-cpu` in the requested
      range (e.g., 2.19.0rc0), but pre-releases weren't enabled (try:
      `--prerelease=allow`)

      hint: You require CPython 3.11 (`cp311`), but we only found wheels for
      `tensorflow-cpu` (v2.11.1) with the following Python ABI tags: `cp38`,
      `cp39`, `cp310`

      hint: Wheels are available for `tensorflow-cpu` (v2.18.0) on the
      following platforms: `manylinux_2_17_x86_64`, `manylinux2014_x86_64`,
      `win_amd64`
uv error code: 1
-- Current requirements -------------------------------------------------
 Python:   3.11.11 (reticulate default)
 Packages: numpy, keras, pydot, scipy, pandas, Pillow, ipython,
           tensorflow-cpu
-------------------------------------------------------------------------
Error in uv_get_or_create_env() : 
  Call `py_require()` to remove or replace conflicting requirements.
  × No solution found when resolving `--with` dependencies:
  ╰─▶ Because only the following versions of tensorflow-cpu are available:
          tensorflow-cpu==1.15.0
          tensorflow-cpu==2.1.0
          tensorflow-cpu==2.1.1
          tensorflow-cpu==2.1.2
          tensorflow-cpu==2.1.3
          tensorflow-cpu==2.1.4
          tensorflow-cpu==2.2.0
          tensorflow-cpu==2.2.1
          tensorflow-cpu==2.2.2
          tensorflow-cpu==2.2.3
          tensorflow-cpu==2.3.0
          tensorflow-cpu==2.3.1
          tensorflow-cpu==2.3.2
          tensorflow-cpu==2.3.3
          tensorflow-cpu==2.3.4
          tensorflow-cpu==2.4.0
          tensorflow-cpu==2.4.1
          tensorflow-cpu==2.4.2
          tensorflow-cpu==2.4.3
          tensorflow-cpu==2.4.4
          tensorflow-cpu==2.5.0
          tensorflow-cpu==2.5.1
          tensorflow-cpu==2.5.2
          tensorflow-cpu==2.5.3
          tensorflow-cpu==2.6.0
          tensorflow-cpu==2.6.1
          tensorflow-cpu==2.6.2
          tensorflow-cpu==2.6.3
          tensorflow-cpu==2.6.4
          tensorflow-cpu==2.6.5
          tensorflow-cpu==2.7.0
          tensorflow-cpu==2.7.1
          tensorflow-cpu==2.7.2
          tensorflow-cpu==2.7.3
          tensorflow-cpu==2.7.4
          tensorflow-cpu==2.8.0
          tensorflow-cpu==2.8.1
          tensorflow-cpu==2.8.2
          tensorflow-cpu==2.8.3
          tensorflow-cpu==2.8.4
          tensorflow-cpu==2.9.0
          tensorflow-cpu==2.9.1
          tensorflow-cpu==2.9.2
          tensorflow-cpu==2.9.3
          tensorflow-cpu==2.10.0
          tensorflow-cpu==2.10.1
          tensorflow-cpu==2.11.0
          tensorflow-cpu==2.11.1
          tensorflow-cpu==2.12.0
          tensorflow-cpu==2.12.1
          tensorflow-cpu==2.13.0
          tensorflow-cpu==2.13.1
          tensorflow-cpu==2.14.0
          tensorflow-cpu==2.14.1
          tensorflow-cpu==2.15.0
          tensorflow-cpu==2.15.0.post1
          tensorflow-cpu==2.15.1
          tensorflow-cpu==2.16.1
          tensorflow-cpu==2.16.2
          tensorflow-cpu==2.17.0
          tensorflow-cpu==2.17.1
          tensorflow-cpu==2.18.0
      and tensorflow-cpu<=2.11.1 has no wheels with a matching Python ABI
      tag (e.g., `cp311`), we can conclude that tensorflow-cpu<=2.11.1 cannot
      be used.
      And because tensorflow-cpu>=2.12.0 has no wheels with a matching
      platform tag (e.g., `manylinux_2_38_aarch64`) and you require
      tensorflow-cpu, we can conclude that your requirements are
      unsatisfiable.

      hint: Pre-releases are available for `tensorflow-cpu` in the requested
      range (e.g., 2.19.0rc0), but pre-releases weren't enabled (try:
      `--prerelease=allow`)

      hint: You require CPython 3.11 (`cp311`), but we only found wheels for
      `tensorflow-cpu` (v2.11.1) with the following Python ABI tags: `cp38`,
      `cp39`, `cp310`

      hint: Wheels are available for `tensorflow-cpu` (v2.18.0) on the
      following platforms: `manylinux_2_17_x86_64`, `manylinux2014_x86_64`,
      `win_amd64`
uv error code: 1
-- Current requirements -------------------------------------------------
 Python:   3.11.11 (reticulate default)
 Packages: numpy, keras, pydot, scipy, pandas, Pillow, ipython,
           tensorflow-cpu
-------------------------------------------------------------------------
Error in uv_get_or_create_env() : 
  Call `py_require()` to remove or replace conflicting requirements.
  × No solution found when resolving `--with` dependencies:
  ╰─▶ Because only the following versions of tensorflow-cpu are available:
          tensorflow-cpu==1.15.0
          tensorflow-cpu==2.1.0
          tensorflow-cpu==2.1.1
          tensorflow-cpu==2.1.2
          tensorflow-cpu==2.1.3
          tensorflow-cpu==2.1.4
          tensorflow-cpu==2.2.0
          tensorflow-cpu==2.2.1
          tensorflow-cpu==2.2.2
          tensorflow-cpu==2.2.3
          tensorflow-cpu==2.3.0
          tensorflow-cpu==2.3.1
          tensorflow-cpu==2.3.2
          tensorflow-cpu==2.3.3
          tensorflow-cpu==2.3.4
          tensorflow-cpu==2.4.0
          tensorflow-cpu==2.4.1
          tensorflow-cpu==2.4.2
          tensorflow-cpu==2.4.3
          tensorflow-cpu==2.4.4
          tensorflow-cpu==2.5.0
          tensorflow-cpu==2.5.1
          tensorflow-cpu==2.5.2
          tensorflow-cpu==2.5.3
          tensorflow-cpu==2.6.0
          tensorflow-cpu==2.6.1
          tensorflow-cpu==2.6.2
          tensorflow-cpu==2.6.3
          tensorflow-cpu==2.6.4
          tensorflow-cpu==2.6.5
          tensorflow-cpu==2.7.0
          tensorflow-cpu==2.7.1
          tensorflow-cpu==2.7.2
          tensorflow-cpu==2.7.3
          tensorflow-cpu==2.7.4
          tensorflow-cpu==2.8.0
          tensorflow-cpu==2.8.1
          tensorflow-cpu==2.8.2
          tensorflow-cpu==2.8.3
          tensorflow-cpu==2.8.4
          tensorflow-cpu==2.9.0
          tensorflow-cpu==2.9.1
          tensorflow-cpu==2.9.2
          tensorflow-cpu==2.9.3
          tensorflow-cpu==2.10.0
          tensorflow-cpu==2.10.1
          tensorflow-cpu==2.11.0
          tensorflow-cpu==2.11.1
          tensorflow-cpu==2.12.0
          tensorflow-cpu==2.12.1
          tensorflow-cpu==2.13.0
          tensorflow-cpu==2.13.1
          tensorflow-cpu==2.14.0
          tensorflow-cpu==2.14.1
          tensorflow-cpu==2.15.0
          tensorflow-cpu==2.15.0.post1
          tensorflow-cpu==2.15.1
          tensorflow-cpu==2.16.1
          tensorflow-cpu==2.16.2
          tensorflow-cpu==2.17.0
          tensorflow-cpu==2.17.1
          tensorflow-cpu==2.18.0
      and tensorflow-cpu<=2.11.1 has no wheels with a matching Python ABI
      tag (e.g., `cp311`), we can conclude that tensorflow-cpu<=2.11.1 cannot
      be used.
      And because tensorflow-cpu>=2.12.0 has no wheels with a matching
      platform tag (e.g., `manylinux_2_38_aarch64`) and you require
      tensorflow-cpu, we can conclude that your requirements are
      unsatisfiable.

      hint: Pre-releases are available for `tensorflow-cpu` in the requested
      range (e.g., 2.19.0rc0), but pre-releases weren't enabled (try:
      `--prerelease=allow`)

      hint: You require CPython 3.11 (`cp311`), but we only found wheels for
      `tensorflow-cpu` (v2.11.1) with the following Python ABI tags: `cp38`,
      `cp39`, `cp310`

      hint: Wheels are available for `tensorflow-cpu` (v2.18.0) on the
      following platforms: `manylinux_2_17_x86_64`, `manylinux2014_x86_64`,
      `win_amd64`
uv error code: 1
-- Current requirements -------------------------------------------------
 Python:   3.11.11 (reticulate default)
 Packages: numpy, keras, pydot, scipy, pandas, Pillow, ipython,
           tensorflow-cpu
-------------------------------------------------------------------------
Error in uv_get_or_create_env() : 
  Call `py_require()` to remove or replace conflicting requirements.
  × No solution found when resolving `--with` dependencies:
  ╰─▶ Because only the following versions of tensorflow-cpu are available:
          tensorflow-cpu==1.15.0
          tensorflow-cpu==2.1.0
          tensorflow-cpu==2.1.1
          tensorflow-cpu==2.1.2
          tensorflow-cpu==2.1.3
          tensorflow-cpu==2.1.4
          tensorflow-cpu==2.2.0
          tensorflow-cpu==2.2.1
          tensorflow-cpu==2.2.2
          tensorflow-cpu==2.2.3
          tensorflow-cpu==2.3.0
          tensorflow-cpu==2.3.1
          tensorflow-cpu==2.3.2
          tensorflow-cpu==2.3.3
          tensorflow-cpu==2.3.4
          tensorflow-cpu==2.4.0
          tensorflow-cpu==2.4.1
          tensorflow-cpu==2.4.2
          tensorflow-cpu==2.4.3
          tensorflow-cpu==2.4.4
          tensorflow-cpu==2.5.0
          tensorflow-cpu==2.5.1
          tensorflow-cpu==2.5.2
          tensorflow-cpu==2.5.3
          tensorflow-cpu==2.6.0
          tensorflow-cpu==2.6.1
          tensorflow-cpu==2.6.2
          tensorflow-cpu==2.6.3
          tensorflow-cpu==2.6.4
          tensorflow-cpu==2.6.5
          tensorflow-cpu==2.7.0
          tensorflow-cpu==2.7.1
          tensorflow-cpu==2.7.2
          tensorflow-cpu==2.7.3
          tensorflow-cpu==2.7.4
          tensorflow-cpu==2.8.0
          tensorflow-cpu==2.8.1
          tensorflow-cpu==2.8.2
          tensorflow-cpu==2.8.3
          tensorflow-cpu==2.8.4
          tensorflow-cpu==2.9.0
          tensorflow-cpu==2.9.1
          tensorflow-cpu==2.9.2
          tensorflow-cpu==2.9.3
          tensorflow-cpu==2.10.0
          tensorflow-cpu==2.10.1
          tensorflow-cpu==2.11.0
          tensorflow-cpu==2.11.1
          tensorflow-cpu==2.12.0
          tensorflow-cpu==2.12.1
          tensorflow-cpu==2.13.0
          tensorflow-cpu==2.13.1
          tensorflow-cpu==2.14.0
          tensorflow-cpu==2.14.1
          tensorflow-cpu==2.15.0
          tensorflow-cpu==2.15.0.post1
          tensorflow-cpu==2.15.1
          tensorflow-cpu==2.16.1
          tensorflow-cpu==2.16.2
          tensorflow-cpu==2.17.0
          tensorflow-cpu==2.17.1
          tensorflow-cpu==2.18.0
      and tensorflow-cpu<=2.11.1 has no wheels with a matching Python ABI
      tag (e.g., `cp311`), we can conclude that tensorflow-cpu<=2.11.1 cannot
      be used.
      And because tensorflow-cpu>=2.12.0 has no wheels with a matching
      platform tag (e.g., `manylinux_2_38_aarch64`) and you require
      tensorflow-cpu, we can conclude that your requirements are
      unsatisfiable.

      hint: Pre-releases are available for `tensorflow-cpu` in the requested
      range (e.g., 2.19.0rc0), but pre-releases weren't enabled (try:
      `--prerelease=allow`)

      hint: You require CPython 3.11 (`cp311`), but we only found wheels for
      `tensorflow-cpu` (v2.11.1) with the following Python ABI tags: `cp38`,
      `cp39`, `cp310`

      hint: Wheels are available for `tensorflow-cpu` (v2.18.0) on the
      following platforms: `manylinux_2_17_x86_64`, `manylinux2014_x86_64`,
      `win_amd64`
uv error code: 1
-- Current requirements -------------------------------------------------
 Python:   3.11.11 (reticulate default)
 Packages: numpy, keras, pydot, scipy, pandas, Pillow, ipython,
           tensorflow-cpu
-------------------------------------------------------------------------
Error in uv_get_or_create_env() : 
  Call `py_require()` to remove or replace conflicting requirements.
  × No solution found when resolving `--with` dependencies:
  ╰─▶ Because only the following versions of tensorflow-cpu are available:
          tensorflow-cpu==1.15.0
          tensorflow-cpu==2.1.0
          tensorflow-cpu==2.1.1
          tensorflow-cpu==2.1.2
          tensorflow-cpu==2.1.3
          tensorflow-cpu==2.1.4
          tensorflow-cpu==2.2.0
          tensorflow-cpu==2.2.1
          tensorflow-cpu==2.2.2
          tensorflow-cpu==2.2.3
          tensorflow-cpu==2.3.0
          tensorflow-cpu==2.3.1
          tensorflow-cpu==2.3.2
          tensorflow-cpu==2.3.3
          tensorflow-cpu==2.3.4
          tensorflow-cpu==2.4.0
          tensorflow-cpu==2.4.1
          tensorflow-cpu==2.4.2
          tensorflow-cpu==2.4.3
          tensorflow-cpu==2.4.4
          tensorflow-cpu==2.5.0
          tensorflow-cpu==2.5.1
          tensorflow-cpu==2.5.2
          tensorflow-cpu==2.5.3
          tensorflow-cpu==2.6.0
          tensorflow-cpu==2.6.1
          tensorflow-cpu==2.6.2
          tensorflow-cpu==2.6.3
          tensorflow-cpu==2.6.4
          tensorflow-cpu==2.6.5
          tensorflow-cpu==2.7.0
          tensorflow-cpu==2.7.1
          tensorflow-cpu==2.7.2
          tensorflow-cpu==2.7.3
          tensorflow-cpu==2.7.4
          tensorflow-cpu==2.8.0
          tensorflow-cpu==2.8.1
          tensorflow-cpu==2.8.2
          tensorflow-cpu==2.8.3
          tensorflow-cpu==2.8.4
          tensorflow-cpu==2.9.0
          tensorflow-cpu==2.9.1
          tensorflow-cpu==2.9.2
          tensorflow-cpu==2.9.3
          tensorflow-cpu==2.10.0
          tensorflow-cpu==2.10.1
          tensorflow-cpu==2.11.0
          tensorflow-cpu==2.11.1
          tensorflow-cpu==2.12.0
          tensorflow-cpu==2.12.1
          tensorflow-cpu==2.13.0
          tensorflow-cpu==2.13.1
          tensorflow-cpu==2.14.0
          tensorflow-cpu==2.14.1
          tensorflow-cpu==2.15.0
          tensorflow-cpu==2.15.0.post1
          tensorflow-cpu==2.15.1
          tensorflow-cpu==2.16.1
          tensorflow-cpu==2.16.2
          tensorflow-cpu==2.17.0
          tensorflow-cpu==2.17.1
          tensorflow-cpu==2.18.0
      and tensorflow-cpu<=2.11.1 has no wheels with a matching Python ABI
      tag (e.g., `cp311`), we can conclude that tensorflow-cpu<=2.11.1 cannot
      be used.
      And because tensorflow-cpu>=2.12.0 has no wheels with a matching
      platform tag (e.g., `manylinux_2_38_aarch64`) and you require
      tensorflow-cpu, we can conclude that your requirements are
      unsatisfiable.

      hint: Pre-releases are available for `tensorflow-cpu` in the requested
      range (e.g., 2.19.0rc0), but pre-releases weren't enabled (try:
      `--prerelease=allow`)

      hint: You require CPython 3.11 (`cp311`), but we only found wheels for
      `tensorflow-cpu` (v2.11.1) with the following Python ABI tags: `cp38`,
      `cp39`, `cp310`

      hint: Wheels are available for `tensorflow-cpu` (v2.18.0) on the
      following platforms: `manylinux_2_17_x86_64`, `manylinux2014_x86_64`,
      `win_amd64`
uv error code: 1
-- Current requirements -------------------------------------------------
 Python:   3.11.11 (reticulate default)
 Packages: numpy, keras, pydot, scipy, pandas, Pillow, ipython,
           tensorflow-cpu
-------------------------------------------------------------------------
Error in uv_get_or_create_env() : 
  Call `py_require()` to remove or replace conflicting requirements.
  × No solution found when resolving `--with` dependencies:
  ╰─▶ Because only the following versions of tensorflow-cpu are available:
          tensorflow-cpu==1.15.0
          tensorflow-cpu==2.1.0
          tensorflow-cpu==2.1.1
          tensorflow-cpu==2.1.2
          tensorflow-cpu==2.1.3
          tensorflow-cpu==2.1.4
          tensorflow-cpu==2.2.0
          tensorflow-cpu==2.2.1
          tensorflow-cpu==2.2.2
          tensorflow-cpu==2.2.3
          tensorflow-cpu==2.3.0
          tensorflow-cpu==2.3.1
          tensorflow-cpu==2.3.2
          tensorflow-cpu==2.3.3
          tensorflow-cpu==2.3.4
          tensorflow-cpu==2.4.0
          tensorflow-cpu==2.4.1
          tensorflow-cpu==2.4.2
          tensorflow-cpu==2.4.3
          tensorflow-cpu==2.4.4
          tensorflow-cpu==2.5.0
          tensorflow-cpu==2.5.1
          tensorflow-cpu==2.5.2
          tensorflow-cpu==2.5.3
          tensorflow-cpu==2.6.0
          tensorflow-cpu==2.6.1
          tensorflow-cpu==2.6.2
          tensorflow-cpu==2.6.3
          tensorflow-cpu==2.6.4
          tensorflow-cpu==2.6.5
          tensorflow-cpu==2.7.0
          tensorflow-cpu==2.7.1
          tensorflow-cpu==2.7.2
          tensorflow-cpu==2.7.3
          tensorflow-cpu==2.7.4
          tensorflow-cpu==2.8.0
          tensorflow-cpu==2.8.1
          tensorflow-cpu==2.8.2
          tensorflow-cpu==2.8.3
          tensorflow-cpu==2.8.4
          tensorflow-cpu==2.9.0
          tensorflow-cpu==2.9.1
          tensorflow-cpu==2.9.2
          tensorflow-cpu==2.9.3
          tensorflow-cpu==2.10.0
          tensorflow-cpu==2.10.1
          tensorflow-cpu==2.11.0
          tensorflow-cpu==2.11.1
          tensorflow-cpu==2.12.0
          tensorflow-cpu==2.12.1
          tensorflow-cpu==2.13.0
          tensorflow-cpu==2.13.1
          tensorflow-cpu==2.14.0
          tensorflow-cpu==2.14.1
          tensorflow-cpu==2.15.0
          tensorflow-cpu==2.15.0.post1
          tensorflow-cpu==2.15.1
          tensorflow-cpu==2.16.1
          tensorflow-cpu==2.16.2
          tensorflow-cpu==2.17.0
          tensorflow-cpu==2.17.1
          tensorflow-cpu==2.18.0
      and tensorflow-cpu<=2.11.1 has no wheels with a matching Python ABI
      tag (e.g., `cp311`), we can conclude that tensorflow-cpu<=2.11.1 cannot
      be used.
      And because tensorflow-cpu>=2.12.0 has no wheels with a matching
      platform tag (e.g., `manylinux_2_38_aarch64`) and you require
      tensorflow-cpu, we can conclude that your requirements are
      unsatisfiable.

      hint: Pre-releases are available for `tensorflow-cpu` in the requested
      range (e.g., 2.19.0rc0), but pre-releases weren't enabled (try:
      `--prerelease=allow`)

      hint: You require CPython 3.11 (`cp311`), but we only found wheels for
      `tensorflow-cpu` (v2.11.1) with the following Python ABI tags: `cp38`,
      `cp39`, `cp310`

      hint: Wheels are available for `tensorflow-cpu` (v2.18.0) on the
      following platforms: `manylinux_2_17_x86_64`, `manylinux2014_x86_64`,
      `win_amd64`
uv error code: 1
-- Current requirements -------------------------------------------------
 Python:   3.11.11 (reticulate default)
 Packages: numpy, keras, pydot, scipy, pandas, Pillow, ipython,
           tensorflow-cpu
-------------------------------------------------------------------------
Error in uv_get_or_create_env() : 
  Call `py_require()` to remove or replace conflicting requirements.
  × No solution found when resolving `--with` dependencies:
  ╰─▶ Because only the following versions of tensorflow-cpu are available:
          tensorflow-cpu==1.15.0
          tensorflow-cpu==2.1.0
          tensorflow-cpu==2.1.1
          tensorflow-cpu==2.1.2
          tensorflow-cpu==2.1.3
          tensorflow-cpu==2.1.4
          tensorflow-cpu==2.2.0
          tensorflow-cpu==2.2.1
          tensorflow-cpu==2.2.2
          tensorflow-cpu==2.2.3
          tensorflow-cpu==2.3.0
          tensorflow-cpu==2.3.1
          tensorflow-cpu==2.3.2
          tensorflow-cpu==2.3.3
          tensorflow-cpu==2.3.4
          tensorflow-cpu==2.4.0
          tensorflow-cpu==2.4.1
          tensorflow-cpu==2.4.2
          tensorflow-cpu==2.4.3
          tensorflow-cpu==2.4.4
          tensorflow-cpu==2.5.0
          tensorflow-cpu==2.5.1
          tensorflow-cpu==2.5.2
          tensorflow-cpu==2.5.3
          tensorflow-cpu==2.6.0
          tensorflow-cpu==2.6.1
          tensorflow-cpu==2.6.2
          tensorflow-cpu==2.6.3
          tensorflow-cpu==2.6.4
          tensorflow-cpu==2.6.5
          tensorflow-cpu==2.7.0
          tensorflow-cpu==2.7.1
          tensorflow-cpu==2.7.2
          tensorflow-cpu==2.7.3
          tensorflow-cpu==2.7.4
          tensorflow-cpu==2.8.0
          tensorflow-cpu==2.8.1
          tensorflow-cpu==2.8.2
          tensorflow-cpu==2.8.3
          tensorflow-cpu==2.8.4
          tensorflow-cpu==2.9.0
          tensorflow-cpu==2.9.1
          tensorflow-cpu==2.9.2
          tensorflow-cpu==2.9.3
          tensorflow-cpu==2.10.0
          tensorflow-cpu==2.10.1
          tensorflow-cpu==2.11.0
          tensorflow-cpu==2.11.1
          tensorflow-cpu==2.12.0
          tensorflow-cpu==2.12.1
          tensorflow-cpu==2.13.0
          tensorflow-cpu==2.13.1
          tensorflow-cpu==2.14.0
          tensorflow-cpu==2.14.1
          tensorflow-cpu==2.15.0
          tensorflow-cpu==2.15.0.post1
          tensorflow-cpu==2.15.1
          tensorflow-cpu==2.16.1
          tensorflow-cpu==2.16.2
          tensorflow-cpu==2.17.0
          tensorflow-cpu==2.17.1
          tensorflow-cpu==2.18.0
      and tensorflow-cpu<=2.11.1 has no wheels with a matching Python ABI
      tag (e.g., `cp311`), we can conclude that tensorflow-cpu<=2.11.1 cannot
      be used.
      And because tensorflow-cpu>=2.12.0 has no wheels with a matching
      platform tag (e.g., `manylinux_2_38_aarch64`) and you require
      tensorflow-cpu, we can conclude that your requirements are
      unsatisfiable.

      hint: Pre-releases are available for `tensorflow-cpu` in the requested
      range (e.g., 2.19.0rc0), but pre-releases weren't enabled (try:
      `--prerelease=allow`)

      hint: You require CPython 3.11 (`cp311`), but we only found wheels for
      `tensorflow-cpu` (v2.11.1) with the following Python ABI tags: `cp38`,
      `cp39`, `cp310`

      hint: Wheels are available for `tensorflow-cpu` (v2.18.0) on the
      following platforms: `manylinux_2_17_x86_64`, `manylinux2014_x86_64`,
      `win_amd64`
uv error code: 1
-- Current requirements -------------------------------------------------
 Python:   3.11.11 (reticulate default)
 Packages: numpy, keras, pydot, scipy, pandas, Pillow, ipython,
           tensorflow-cpu
-------------------------------------------------------------------------
Error in uv_get_or_create_env() : 
  Call `py_require()` to remove or replace conflicting requirements.
  × No solution found when resolving `--with` dependencies:
  ╰─▶ Because only the following versions of tensorflow-cpu are available:
          tensorflow-cpu==1.15.0
          tensorflow-cpu==2.1.0
          tensorflow-cpu==2.1.1
          tensorflow-cpu==2.1.2
          tensorflow-cpu==2.1.3
          tensorflow-cpu==2.1.4
          tensorflow-cpu==2.2.0
          tensorflow-cpu==2.2.1
          tensorflow-cpu==2.2.2
          tensorflow-cpu==2.2.3
          tensorflow-cpu==2.3.0
          tensorflow-cpu==2.3.1
          tensorflow-cpu==2.3.2
          tensorflow-cpu==2.3.3
          tensorflow-cpu==2.3.4
          tensorflow-cpu==2.4.0
          tensorflow-cpu==2.4.1
          tensorflow-cpu==2.4.2
          tensorflow-cpu==2.4.3
          tensorflow-cpu==2.4.4
          tensorflow-cpu==2.5.0
          tensorflow-cpu==2.5.1
          tensorflow-cpu==2.5.2
          tensorflow-cpu==2.5.3
          tensorflow-cpu==2.6.0
          tensorflow-cpu==2.6.1
          tensorflow-cpu==2.6.2
          tensorflow-cpu==2.6.3
          tensorflow-cpu==2.6.4
          tensorflow-cpu==2.6.5
          tensorflow-cpu==2.7.0
          tensorflow-cpu==2.7.1
          tensorflow-cpu==2.7.2
          tensorflow-cpu==2.7.3
          tensorflow-cpu==2.7.4
          tensorflow-cpu==2.8.0
          tensorflow-cpu==2.8.1
          tensorflow-cpu==2.8.2
          tensorflow-cpu==2.8.3
          tensorflow-cpu==2.8.4
          tensorflow-cpu==2.9.0
          tensorflow-cpu==2.9.1
          tensorflow-cpu==2.9.2
          tensorflow-cpu==2.9.3
          tensorflow-cpu==2.10.0
          tensorflow-cpu==2.10.1
          tensorflow-cpu==2.11.0
          tensorflow-cpu==2.11.1
          tensorflow-cpu==2.12.0
          tensorflow-cpu==2.12.1
          tensorflow-cpu==2.13.0
          tensorflow-cpu==2.13.1
          tensorflow-cpu==2.14.0
          tensorflow-cpu==2.14.1
          tensorflow-cpu==2.15.0
          tensorflow-cpu==2.15.0.post1
          tensorflow-cpu==2.15.1
          tensorflow-cpu==2.16.1
          tensorflow-cpu==2.16.2
          tensorflow-cpu==2.17.0
          tensorflow-cpu==2.17.1
          tensorflow-cpu==2.18.0
      and tensorflow-cpu<=2.11.1 has no wheels with a matching Python ABI
      tag (e.g., `cp311`), we can conclude that tensorflow-cpu<=2.11.1 cannot
      be used.
      And because tensorflow-cpu>=2.12.0 has no wheels with a matching
      platform tag (e.g., `manylinux_2_38_aarch64`) and you require
      tensorflow-cpu, we can conclude that your requirements are
      unsatisfiable.

      hint: Pre-releases are available for `tensorflow-cpu` in the requested
      range (e.g., 2.19.0rc0), but pre-releases weren't enabled (try:
      `--prerelease=allow`)

      hint: You require CPython 3.11 (`cp311`), but we only found wheels for
      `tensorflow-cpu` (v2.11.1) with the following Python ABI tags: `cp38`,
      `cp39`, `cp310`

      hint: Wheels are available for `tensorflow-cpu` (v2.18.0) on the
      following platforms: `manylinux_2_17_x86_64`, `manylinux2014_x86_64`,
      `win_amd64`
uv error code: 1
-- Current requirements -------------------------------------------------
 Python:   3.11.11 (reticulate default)
 Packages: numpy, keras, pydot, scipy, pandas, Pillow, ipython,
           tensorflow-cpu
-------------------------------------------------------------------------
Error in uv_get_or_create_env() : 
  Call `py_require()` to remove or replace conflicting requirements.
  × No solution found when resolving `--with` dependencies:
  ╰─▶ Because only the following versions of tensorflow-cpu are available:
          tensorflow-cpu==1.15.0
          tensorflow-cpu==2.1.0
          tensorflow-cpu==2.1.1
          tensorflow-cpu==2.1.2
          tensorflow-cpu==2.1.3
          tensorflow-cpu==2.1.4
          tensorflow-cpu==2.2.0
          tensorflow-cpu==2.2.1
          tensorflow-cpu==2.2.2
          tensorflow-cpu==2.2.3
          tensorflow-cpu==2.3.0
          tensorflow-cpu==2.3.1
          tensorflow-cpu==2.3.2
          tensorflow-cpu==2.3.3
          tensorflow-cpu==2.3.4
          tensorflow-cpu==2.4.0
          tensorflow-cpu==2.4.1
          tensorflow-cpu==2.4.2
          tensorflow-cpu==2.4.3
          tensorflow-cpu==2.4.4
          tensorflow-cpu==2.5.0
          tensorflow-cpu==2.5.1
          tensorflow-cpu==2.5.2
          tensorflow-cpu==2.5.3
          tensorflow-cpu==2.6.0
          tensorflow-cpu==2.6.1
          tensorflow-cpu==2.6.2
          tensorflow-cpu==2.6.3
          tensorflow-cpu==2.6.4
          tensorflow-cpu==2.6.5
          tensorflow-cpu==2.7.0
          tensorflow-cpu==2.7.1
          tensorflow-cpu==2.7.2
          tensorflow-cpu==2.7.3
          tensorflow-cpu==2.7.4
          tensorflow-cpu==2.8.0
          tensorflow-cpu==2.8.1
          tensorflow-cpu==2.8.2
          tensorflow-cpu==2.8.3
          tensorflow-cpu==2.8.4
          tensorflow-cpu==2.9.0
          tensorflow-cpu==2.9.1
          tensorflow-cpu==2.9.2
          tensorflow-cpu==2.9.3
          tensorflow-cpu==2.10.0
          tensorflow-cpu==2.10.1
          tensorflow-cpu==2.11.0
          tensorflow-cpu==2.11.1
          tensorflow-cpu==2.12.0
          tensorflow-cpu==2.12.1
          tensorflow-cpu==2.13.0
          tensorflow-cpu==2.13.1
          tensorflow-cpu==2.14.0
          tensorflow-cpu==2.14.1
          tensorflow-cpu==2.15.0
          tensorflow-cpu==2.15.0.post1
          tensorflow-cpu==2.15.1
          tensorflow-cpu==2.16.1
          tensorflow-cpu==2.16.2
          tensorflow-cpu==2.17.0
          tensorflow-cpu==2.17.1
          tensorflow-cpu==2.18.0
      and tensorflow-cpu<=2.11.1 has no wheels with a matching Python ABI
      tag (e.g., `cp311`), we can conclude that tensorflow-cpu<=2.11.1 cannot
      be used.
      And because tensorflow-cpu>=2.12.0 has no wheels with a matching
      platform tag (e.g., `manylinux_2_38_aarch64`) and you require
      tensorflow-cpu, we can conclude that your requirements are
      unsatisfiable.

      hint: Pre-releases are available for `tensorflow-cpu` in the requested
      range (e.g., 2.19.0rc0), but pre-releases weren't enabled (try:
      `--prerelease=allow`)

      hint: You require CPython 3.11 (`cp311`), but we only found wheels for
      `tensorflow-cpu` (v2.11.1) with the following Python ABI tags: `cp38`,
      `cp39`, `cp310`

      hint: Wheels are available for `tensorflow-cpu` (v2.18.0) on the
      following platforms: `manylinux_2_17_x86_64`, `manylinux2014_x86_64`,
      `win_amd64`
uv error code: 1
-- Current requirements -------------------------------------------------
 Python:   3.11.11 (reticulate default)
 Packages: numpy, keras, pydot, scipy, pandas, Pillow, ipython,
           tensorflow-cpu
-------------------------------------------------------------------------
Error in uv_get_or_create_env() : 
  Call `py_require()` to remove or replace conflicting requirements.
  × No solution found when resolving `--with` dependencies:
  ╰─▶ Because only the following versions of tensorflow-cpu are available:
          tensorflow-cpu==1.15.0
          tensorflow-cpu==2.1.0
          tensorflow-cpu==2.1.1
          tensorflow-cpu==2.1.2
          tensorflow-cpu==2.1.3
          tensorflow-cpu==2.1.4
          tensorflow-cpu==2.2.0
          tensorflow-cpu==2.2.1
          tensorflow-cpu==2.2.2
          tensorflow-cpu==2.2.3
          tensorflow-cpu==2.3.0
          tensorflow-cpu==2.3.1
          tensorflow-cpu==2.3.2
          tensorflow-cpu==2.3.3
          tensorflow-cpu==2.3.4
          tensorflow-cpu==2.4.0
          tensorflow-cpu==2.4.1
          tensorflow-cpu==2.4.2
          tensorflow-cpu==2.4.3
          tensorflow-cpu==2.4.4
          tensorflow-cpu==2.5.0
          tensorflow-cpu==2.5.1
          tensorflow-cpu==2.5.2
          tensorflow-cpu==2.5.3
          tensorflow-cpu==2.6.0
          tensorflow-cpu==2.6.1
          tensorflow-cpu==2.6.2
          tensorflow-cpu==2.6.3
          tensorflow-cpu==2.6.4
          tensorflow-cpu==2.6.5
          tensorflow-cpu==2.7.0
          tensorflow-cpu==2.7.1
          tensorflow-cpu==2.7.2
          tensorflow-cpu==2.7.3
          tensorflow-cpu==2.7.4
          tensorflow-cpu==2.8.0
          tensorflow-cpu==2.8.1
          tensorflow-cpu==2.8.2
          tensorflow-cpu==2.8.3
          tensorflow-cpu==2.8.4
          tensorflow-cpu==2.9.0
          tensorflow-cpu==2.9.1
          tensorflow-cpu==2.9.2
          tensorflow-cpu==2.9.3
          tensorflow-cpu==2.10.0
          tensorflow-cpu==2.10.1
          tensorflow-cpu==2.11.0
          tensorflow-cpu==2.11.1
          tensorflow-cpu==2.12.0
          tensorflow-cpu==2.12.1
          tensorflow-cpu==2.13.0
          tensorflow-cpu==2.13.1
          tensorflow-cpu==2.14.0
          tensorflow-cpu==2.14.1
          tensorflow-cpu==2.15.0
          tensorflow-cpu==2.15.0.post1
          tensorflow-cpu==2.15.1
          tensorflow-cpu==2.16.1
          tensorflow-cpu==2.16.2
          tensorflow-cpu==2.17.0
          tensorflow-cpu==2.17.1
          tensorflow-cpu==2.18.0
      and tensorflow-cpu<=2.11.1 has no wheels with a matching Python ABI
      tag (e.g., `cp311`), we can conclude that tensorflow-cpu<=2.11.1 cannot
      be used.
      And because tensorflow-cpu>=2.12.0 has no wheels with a matching
      platform tag (e.g., `manylinux_2_38_aarch64`) and you require
      tensorflow-cpu, we can conclude that your requirements are
      unsatisfiable.

      hint: Pre-releases are available for `tensorflow-cpu` in the requested
      range (e.g., 2.19.0rc0), but pre-releases weren't enabled (try:
      `--prerelease=allow`)

      hint: You require CPython 3.11 (`cp311`), but we only found wheels for
      `tensorflow-cpu` (v2.11.1) with the following Python ABI tags: `cp38`,
      `cp39`, `cp310`

      hint: Wheels are available for `tensorflow-cpu` (v2.18.0) on the
      following platforms: `manylinux_2_17_x86_64`, `manylinux2014_x86_64`,
      `win_amd64`
uv error code: 1
-- Current requirements -------------------------------------------------
 Python:   3.11.11 (reticulate default)
 Packages: numpy, keras, pydot, scipy, pandas, Pillow, ipython,
           tensorflow-cpu
-------------------------------------------------------------------------
Error in uv_get_or_create_env() : 
  Call `py_require()` to remove or replace conflicting requirements.
  × No solution found when resolving `--with` dependencies:
  ╰─▶ Because only the following versions of tensorflow-cpu are available:
          tensorflow-cpu==1.15.0
          tensorflow-cpu==2.1.0
          tensorflow-cpu==2.1.1
          tensorflow-cpu==2.1.2
          tensorflow-cpu==2.1.3
          tensorflow-cpu==2.1.4
          tensorflow-cpu==2.2.0
          tensorflow-cpu==2.2.1
          tensorflow-cpu==2.2.2
          tensorflow-cpu==2.2.3
          tensorflow-cpu==2.3.0
          tensorflow-cpu==2.3.1
          tensorflow-cpu==2.3.2
          tensorflow-cpu==2.3.3
          tensorflow-cpu==2.3.4
          tensorflow-cpu==2.4.0
          tensorflow-cpu==2.4.1
          tensorflow-cpu==2.4.2
          tensorflow-cpu==2.4.3
          tensorflow-cpu==2.4.4
          tensorflow-cpu==2.5.0
          tensorflow-cpu==2.5.1
          tensorflow-cpu==2.5.2
          tensorflow-cpu==2.5.3
          tensorflow-cpu==2.6.0
          tensorflow-cpu==2.6.1
          tensorflow-cpu==2.6.2
          tensorflow-cpu==2.6.3
          tensorflow-cpu==2.6.4
          tensorflow-cpu==2.6.5
          tensorflow-cpu==2.7.0
          tensorflow-cpu==2.7.1
          tensorflow-cpu==2.7.2
          tensorflow-cpu==2.7.3
          tensorflow-cpu==2.7.4
          tensorflow-cpu==2.8.0
          tensorflow-cpu==2.8.1
          tensorflow-cpu==2.8.2
          tensorflow-cpu==2.8.3
          tensorflow-cpu==2.8.4
          tensorflow-cpu==2.9.0
          tensorflow-cpu==2.9.1
          tensorflow-cpu==2.9.2
          tensorflow-cpu==2.9.3
          tensorflow-cpu==2.10.0
          tensorflow-cpu==2.10.1
          tensorflow-cpu==2.11.0
          tensorflow-cpu==2.11.1
          tensorflow-cpu==2.12.0
          tensorflow-cpu==2.12.1
          tensorflow-cpu==2.13.0
          tensorflow-cpu==2.13.1
          tensorflow-cpu==2.14.0
          tensorflow-cpu==2.14.1
          tensorflow-cpu==2.15.0
          tensorflow-cpu==2.15.0.post1
          tensorflow-cpu==2.15.1
          tensorflow-cpu==2.16.1
          tensorflow-cpu==2.16.2
          tensorflow-cpu==2.17.0
          tensorflow-cpu==2.17.1
          tensorflow-cpu==2.18.0
      and tensorflow-cpu<=2.11.1 has no wheels with a matching Python ABI
      tag (e.g., `cp311`), we can conclude that tensorflow-cpu<=2.11.1 cannot
      be used.
      And because tensorflow-cpu>=2.12.0 has no wheels with a matching
      platform tag (e.g., `manylinux_2_38_aarch64`) and you require
      tensorflow-cpu, we can conclude that your requirements are
      unsatisfiable.

      hint: Pre-releases are available for `tensorflow-cpu` in the requested
      range (e.g., 2.19.0rc0), but pre-releases weren't enabled (try:
      `--prerelease=allow`)

      hint: You require CPython 3.11 (`cp311`), but we only found wheels for
      `tensorflow-cpu` (v2.11.1) with the following Python ABI tags: `cp38`,
      `cp39`, `cp310`

      hint: Wheels are available for `tensorflow-cpu` (v2.18.0) on the
      following platforms: `manylinux_2_17_x86_64`, `manylinux2014_x86_64`,
      `win_amd64`
uv error code: 1
-- Current requirements -------------------------------------------------
 Python:   3.11.11 (reticulate default)
 Packages: numpy, keras, pydot, scipy, pandas, Pillow, ipython,
           tensorflow-cpu
-------------------------------------------------------------------------
Error in uv_get_or_create_env() : 
  Call `py_require()` to remove or replace conflicting requirements.
  × No solution found when resolving `--with` dependencies:
  ╰─▶ Because only the following versions of tensorflow-cpu are available:
          tensorflow-cpu==1.15.0
          tensorflow-cpu==2.1.0
          tensorflow-cpu==2.1.1
          tensorflow-cpu==2.1.2
          tensorflow-cpu==2.1.3
          tensorflow-cpu==2.1.4
          tensorflow-cpu==2.2.0
          tensorflow-cpu==2.2.1
          tensorflow-cpu==2.2.2
          tensorflow-cpu==2.2.3
          tensorflow-cpu==2.3.0
          tensorflow-cpu==2.3.1
          tensorflow-cpu==2.3.2
          tensorflow-cpu==2.3.3
          tensorflow-cpu==2.3.4
          tensorflow-cpu==2.4.0
          tensorflow-cpu==2.4.1
          tensorflow-cpu==2.4.2
          tensorflow-cpu==2.4.3
          tensorflow-cpu==2.4.4
          tensorflow-cpu==2.5.0
          tensorflow-cpu==2.5.1
          tensorflow-cpu==2.5.2
          tensorflow-cpu==2.5.3
          tensorflow-cpu==2.6.0
          tensorflow-cpu==2.6.1
          tensorflow-cpu==2.6.2
          tensorflow-cpu==2.6.3
          tensorflow-cpu==2.6.4
          tensorflow-cpu==2.6.5
          tensorflow-cpu==2.7.0
          tensorflow-cpu==2.7.1
          tensorflow-cpu==2.7.2
          tensorflow-cpu==2.7.3
          tensorflow-cpu==2.7.4
          tensorflow-cpu==2.8.0
          tensorflow-cpu==2.8.1
          tensorflow-cpu==2.8.2
          tensorflow-cpu==2.8.3
          tensorflow-cpu==2.8.4
          tensorflow-cpu==2.9.0
          tensorflow-cpu==2.9.1
          tensorflow-cpu==2.9.2
          tensorflow-cpu==2.9.3
          tensorflow-cpu==2.10.0
          tensorflow-cpu==2.10.1
          tensorflow-cpu==2.11.0
          tensorflow-cpu==2.11.1
          tensorflow-cpu==2.12.0
          tensorflow-cpu==2.12.1
          tensorflow-cpu==2.13.0
          tensorflow-cpu==2.13.1
          tensorflow-cpu==2.14.0
          tensorflow-cpu==2.14.1
          tensorflow-cpu==2.15.0
          tensorflow-cpu==2.15.0.post1
          tensorflow-cpu==2.15.1
          tensorflow-cpu==2.16.1
          tensorflow-cpu==2.16.2
          tensorflow-cpu==2.17.0
          tensorflow-cpu==2.17.1
          tensorflow-cpu==2.18.0
      and tensorflow-cpu<=2.11.1 has no wheels with a matching Python ABI
      tag (e.g., `cp311`), we can conclude that tensorflow-cpu<=2.11.1 cannot
      be used.
      And because tensorflow-cpu>=2.12.0 has no wheels with a matching
      platform tag (e.g., `manylinux_2_38_aarch64`) and you require
      tensorflow-cpu, we can conclude that your requirements are
      unsatisfiable.

      hint: Pre-releases are available for `tensorflow-cpu` in the requested
      range (e.g., 2.19.0rc0), but pre-releases weren't enabled (try:
      `--prerelease=allow`)

      hint: You require CPython 3.11 (`cp311`), but we only found wheels for
      `tensorflow-cpu` (v2.11.1) with the following Python ABI tags: `cp38`,
      `cp39`, `cp310`

      hint: Wheels are available for `tensorflow-cpu` (v2.18.0) on the
      following platforms: `manylinux_2_17_x86_64`, `manylinux2014_x86_64`,
      `win_amd64`
uv error code: 1
-- Current requirements -------------------------------------------------
 Python:   3.11.11 (reticulate default)
 Packages: numpy, keras, pydot, scipy, pandas, Pillow, ipython,
           tensorflow-cpu
-------------------------------------------------------------------------
Error in uv_get_or_create_env() : 
  Call `py_require()` to remove or replace conflicting requirements.
[ FAIL 0 | WARN 0 | SKIP 7 | PASS 34 ]

══ Skipped tests (7) ═══════════════════════════════════════════════════════════
• Required Python modules (Keras, NumPy) are not available. (6):
  'test-generateSequences.R:10:5', 'test-onehotEncoder.R:10:5',
  'test-propertyEncoder.R:10:5', 'test-sequenceDecoder.R:10:5',
  'test-tokenizeSequences.R:10:5', 'test-variationalSequences.R:10:5'
• empty test (1): 'test-getIR.R:3:1'

[ FAIL 0 | WARN 0 | SKIP 7 | PASS 34 ]
> 
> proc.time()
   user  system elapsed 
191.462  18.714 230.619 

Example timings

immApex.Rcheck/immApex-Ex.timings

nameusersystemelapsed
adjacencyMatrix0.0120.0000.013
formatGenes0.8790.1441.025
generateSequences0.0040.0000.004
geometricEncoder0.2140.0240.237
getIMGT0.6760.0085.246
inferCDR0.5600.0003.573
mutateSequences0.0140.0080.022
onehotEncoder8.6550.9129.733
positionalEncoder0.0150.0000.016
probabilityMatrix0.0070.0000.007
propertyEncoder 9.622 0.94010.672
sequenceDecoder10.506 1.13711.768
tokenizeSequences0.0030.0030.006
variationalSequences11.717 1.17013.024