Britta Velten
| Snapshot Date: 2024-11-08 13:40 -0500 (Fri, 08 Nov 2024) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_20 |
| git_last_commit: 04d5a90 |
| git_last_commit_date: 2024-10-29 10:33:50 -0500 (Tue, 29 Oct 2024) |
| Back to Multiple platform build/check report for BioC 3.20: simplified long |
|
This page was generated on 2024-11-09 21:31 -0500 (Sat, 09 Nov 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| teran2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4505 |
| palomino8 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4506 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4538 |
| kjohnson3 | macOS 13.6.5 Ventura | arm64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4486 |
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4493 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 899/2289 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.22.0 (landing page) Britta Velten
| teran2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino8 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kjohnson3 | macOS 13.6.5 Ventura / arm64 | OK | OK | WARNINGS | OK | | ||||||||
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.22.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.22.0.tar.gz |
| StartedAt: 2024-11-09 03:57:33 -0500 (Sat, 09 Nov 2024) |
| EndedAt: 2024-11-09 04:01:39 -0500 (Sat, 09 Nov 2024) |
| EllapsedTime: 245.4 seconds |
| RetCode: 0 |
| Status: WARNINGS |
| CheckDir: graper.Rcheck |
| Warnings: 1 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.22.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck’
* using R version 4.4.1 (2024-06-14)
* using platform: aarch64-apple-darwin20
* R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 12.2.0
* running under: macOS Ventura 13.6.7
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.22.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ...Warning: unable to access index for repository https://CRAN.R-project.org/src/contrib:
cannot open URL 'https://CRAN.R-project.org/src/contrib/PACKAGES'
OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... WARNING
Found the following significant warnings:
/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/tools/config.hpp:23:6: warning: "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-W#warnings]
# warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
See ‘/Users/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck/00install.out’ for details.
* used C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’
* used SDK: ‘MacOSX11.3.sdk’
* checking C++ specification ... NOTE
Specified C++11: please drop specification unless essential
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 WARNING, 3 NOTEs
See
‘/Users/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################
* installing to library ‘/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’
using C++11
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o
In file included from fit_graper.cpp:4:
In file included from ./graper_linear_dense_ff.h:2:
In file included from /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/special_functions/digamma.hpp:15:
In file included from /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/special_functions/math_fwd.hpp:29:
In file included from /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11:
/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/tools/config.hpp:23:6: warning: "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-W#warnings]
# warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
^
1 warning generated.
clang++ -arch arm64 -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lemutls_w -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.4.1 (2024-06-14) -- "Race for Your Life"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin20
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-873.301
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-576.595
ELB improved by 296.706
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-518.105
ELB improved by 58.4893
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-479.806
ELB improved by 38.2997
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.183
ELB improved by 16.6231
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.507
ELB improved by 6.67557
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.57
ELB improved by 3.93702
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.294
ELB improved by 3.2765
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.174
ELB improved by 3.11946
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.032
ELB improved by 3.14245
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.796
ELB improved by 3.23597
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.491
ELB improved by 3.30439
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.281
ELB improved by 3.21025
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.445
ELB improved by 2.83604
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.219
ELB improved by 2.22648
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.65
ELB improved by 1.56838
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.629
ELB improved by 1.02157
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.983
ELB improved by 0.645751
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.566
ELB improved by 0.417062
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.282
ELB improved by 0.283903
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.076
ELB improved by 0.205953
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.917
ELB improved by 0.158962
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.788
ELB improved by 0.129278
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.678
ELB improved by 0.109376
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.583
ELB improved by 0.0951712
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.499
ELB improved by 0.0844439
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.423
ELB improved by 0.0759684
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.354
ELB improved by 0.0690418
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.29
ELB improved by 0.0632404
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.232
ELB improved by 0.0582944
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.178
ELB improved by 0.0540225
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.128
ELB improved by 0.0502963
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.081
ELB improved by 0.0470207
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.037
ELB improved by 0.044123
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.995
ELB improved by 0.0415457
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.956
ELB improved by 0.0392421
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.919
ELB improved by 0.037174
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.883
ELB improved by 0.0353091
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.85
ELB improved by 0.0336201
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.818
ELB improved by 0.0320838
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.787
ELB improved by 0.0306802
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.758
ELB improved by 0.0293918
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.729
ELB improved by 0.0282037
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.702
ELB improved by 0.0271028
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.676
ELB improved by 0.0260778
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.651
ELB improved by 0.0251186
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.627
ELB improved by 0.0242166
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.604
ELB improved by 0.0233644
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.581
ELB improved by 0.0225555
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.559
ELB improved by 0.0217843
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.538
ELB improved by 0.0210459
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.518
ELB improved by 0.0203363
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.498
ELB improved by 0.0196521
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.479
ELB improved by 0.0189903
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.461
ELB improved by 0.0183486
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.443
ELB improved by 0.0177251
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.426
ELB improved by 0.0171182
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.41
ELB improved by 0.0165269
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.394
ELB improved by 0.0159503
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.378
ELB improved by 0.0153877
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.363
ELB improved by 0.0148387
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.349
ELB improved by 0.0143032
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.335
ELB improved by 0.013781
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.322
ELB improved by 0.0132722
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.309
ELB improved by 0.0127769
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.297
ELB improved by 0.0122952
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.285
ELB improved by 0.0118273
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.274
ELB improved by 0.0113733
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.263
ELB improved by 0.0109335
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.252
ELB improved by 0.0105079
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.242
ELB improved by 0.0100966
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.232
ELB improved by 0.00969978
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-878.399
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-576.92
ELB improved by 301.479
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-513.782
ELB improved by 63.1388
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-473.364
ELB improved by 40.4173
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.82
ELB improved by 17.5442
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.336
ELB improved by 7.48363
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.778
ELB improved by 4.55805
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.22
ELB improved by 3.55885
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.919
ELB improved by 3.30016
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.572
ELB improved by 3.34756
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.123
ELB improved by 3.44912
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.697
ELB improved by 3.42526
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.517
ELB improved by 3.18022
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.779
ELB improved by 2.73801
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.575
ELB improved by 2.20391
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.892
ELB improved by 1.68307
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.62
ELB improved by 1.27184
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.607
ELB improved by 1.01299
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.745
ELB improved by 0.862351
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.998
ELB improved by 0.747398
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.362
ELB improved by 0.635618
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.82
ELB improved by 0.542373
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.342
ELB improved by 0.477919
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.908
ELB improved by 0.433249
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.509
ELB improved by 0.39949
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.134
ELB improved by 0.374484
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.776
ELB improved by 0.358672
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.423
ELB improved by 0.352365
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.067
ELB improved by 0.356384
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.694
ELB improved by 0.373236
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.287
ELB improved by 0.40694
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.828
ELB improved by 0.458707
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.311
ELB improved by 0.517483
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.748
ELB improved by 0.562849
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.157
ELB improved by 0.590599
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.544
ELB improved by 0.613229
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.908
ELB improved by 0.635931
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.256
ELB improved by 0.6525
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.602
ELB improved by 0.653225
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.971
ELB improved by 0.631329
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.384
ELB improved by 0.58655
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.859
ELB improved by 0.525113
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.403
ELB improved by 0.456326
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.015
ELB improved by 0.388351
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.689
ELB improved by 0.325839
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.419
ELB improved by 0.270201
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.197
ELB improved by 0.2213
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.018
ELB improved by 0.178872
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.876
ELB improved by 0.142882
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.762
ELB improved by 0.113208
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.673
ELB improved by 0.0893883
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.602
ELB improved by 0.0706564
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.546
ELB improved by 0.056116
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.501
ELB improved by 0.044902
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.465
ELB improved by 0.036267
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.435
ELB improved by 0.0296053
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.411
ELB improved by 0.0244444
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.391
ELB improved by 0.020423
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.373
ELB improved by 0.0172682
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.359
ELB improved by 0.0147743
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.346
ELB improved by 0.0127866
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.335
ELB improved by 0.0111886
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.325
ELB improved by 0.00989211
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-881.42
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-580.599
ELB improved by 300.822
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-517.025
ELB improved by 63.5735
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-479.187
ELB improved by 37.8382
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.562
ELB improved by 16.6253
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.276
ELB improved by 7.28559
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.701
ELB improved by 4.57547
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.773
ELB improved by 3.92778
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.846
ELB improved by 3.92651
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.643
ELB improved by 4.20296
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.075
ELB improved by 4.56864
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.284
ELB improved by 4.79054
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.698
ELB improved by 4.58623
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.816
ELB improved by 3.88178
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.846
ELB improved by 2.97023
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.687
ELB improved by 2.15906
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.216
ELB improved by 1.47099
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.262
ELB improved by 0.954046
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.618
ELB improved by 0.643541
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.142
ELB improved by 0.476278
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.752
ELB improved by 0.389661
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.404
ELB improved by 0.347904
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.071
ELB improved by 0.333897
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.731
ELB improved by 0.33959
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.373
ELB improved by 0.358248
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.993
ELB improved by 0.379525
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.6
ELB improved by 0.39285
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.205
ELB improved by 0.395774
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.813
ELB improved by 0.391266
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.434
ELB improved by 0.379061
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.076
ELB improved by 0.358116
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.743
ELB improved by 0.333477
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.43
ELB improved by 0.312503
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.132
ELB improved by 0.297947
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.844
ELB improved by 0.288371
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.562
ELB improved by 0.28144
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.287
ELB improved by 0.275556
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.017
ELB improved by 0.269997
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.752
ELB improved by 0.264634
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.493
ELB improved by 0.259641
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.237
ELB improved by 0.255316
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.985
ELB improved by 0.251964
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.735
ELB improved by 0.249848
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.486
ELB improved by 0.249156
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.236
ELB improved by 0.250012
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.984
ELB improved by 0.252489
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.727
ELB improved by 0.256653
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.464
ELB improved by 0.262617
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.194
ELB improved by 0.270631
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.913
ELB improved by 0.28122
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.617
ELB improved by 0.29541
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.302
ELB improved by 0.315071
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.959
ELB improved by 0.343502
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.572
ELB improved by 0.3867
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.115
ELB improved by 0.457204
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.53
ELB improved by 0.584978
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.716
ELB improved by 0.813614
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.704
ELB improved by 1.01198
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.839
ELB improved by 0.865183
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.25
ELB improved by 0.589258
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.862
ELB improved by 0.387404
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.605
ELB improved by 0.257261
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.432
ELB improved by 0.172703
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.315
ELB improved by 0.11702
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.235
ELB improved by 0.0801478
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.18
ELB improved by 0.0556569
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.14
ELB improved by 0.0393368
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.112
ELB improved by 0.0283975
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.091
ELB improved by 0.0210012
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.075
ELB improved by 0.0159482
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.062
ELB improved by 0.0124571
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.052
ELB improved by 0.0100168
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.044
ELB improved by 0.00828996
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-852.345
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-579.521
ELB improved by 272.824
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-520.596
ELB improved by 58.9247
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-481.249
ELB improved by 39.3471
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.774
ELB improved by 16.4756
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.72
ELB improved by 7.05394
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.477
ELB improved by 4.24331
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.985
ELB improved by 3.49175
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.587
ELB improved by 3.39767
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.271
ELB improved by 3.31606
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.259
ELB improved by 3.01195
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.775
ELB improved by 2.48451
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.862
ELB improved by 1.91291
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.393
ELB improved by 1.469
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.193
ELB improved by 1.19936
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.123
ELB improved by 1.06993
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.113
ELB improved by 1.0104
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.158
ELB improved by 0.954711
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.267
ELB improved by 0.891507
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.438
ELB improved by 0.829221
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.674
ELB improved by 0.763638
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.983
ELB improved by 0.690712
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.37
ELB improved by 0.613004
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.834
ELB improved by 0.536155
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.369
ELB improved by 0.465054
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.967
ELB improved by 0.402385
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.618
ELB improved by 0.348843
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.314
ELB improved by 0.303907
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.047
ELB improved by 0.266514
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.812
ELB improved by 0.235492
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.602
ELB improved by 0.209774
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.414
ELB improved by 0.188485
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.243
ELB improved by 0.170977
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.086
ELB improved by 0.156846
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.94
ELB improved by 0.14598
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.801
ELB improved by 0.138666
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.665
ELB improved by 0.135812
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.526
ELB improved by 0.139245
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.375
ELB improved by 0.151541
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.201
ELB improved by 0.173152
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.007
ELB improved by 0.194403
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.812
ELB improved by 0.194997
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.642
ELB improved by 0.170003
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.504
ELB improved by 0.138053
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.391
ELB improved by 0.113059
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.295
ELB improved by 0.0962707
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.21
ELB improved by 0.0850412
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.132
ELB improved by 0.0772521
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.06
ELB improved by 0.0717767
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.992
ELB improved by 0.0681391
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.926
ELB improved by 0.0662829
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.86
ELB improved by 0.0665177
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.79
ELB improved by 0.0695719
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.713
ELB improved by 0.0765982
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.625
ELB improved by 0.0886381
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.52
ELB improved by 0.104493
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.403
ELB improved by 0.11734
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.286
ELB improved by 0.117052
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.184
ELB improved by 0.102265
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.101
ELB improved by 0.0825825
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.035
ELB improved by 0.0659155
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.981
ELB improved by 0.0538918
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.936
ELB improved by 0.0455498
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.896
ELB improved by 0.0398311
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.86
ELB improved by 0.036093
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.826
ELB improved by 0.0341079
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.791
ELB improved by 0.0341387
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.754
ELB improved by 0.0373642
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.707
ELB improved by 0.0473461
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.632
ELB improved by 0.0752306
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.473
ELB improved by 0.15894
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.064
ELB improved by 0.408527
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.235
ELB improved by 0.829379
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.372
ELB improved by 0.862671
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.815
ELB improved by 0.557382
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.495
ELB improved by 0.319473
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.307
ELB improved by 0.188172
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.186
ELB improved by 0.120653
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.101
ELB improved by 0.085172
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.036
ELB improved by 0.0651455
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.983
ELB improved by 0.0528052
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.939
ELB improved by 0.0445332
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.9
ELB improved by 0.0385566
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.866
ELB improved by 0.0339557
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.836
ELB improved by 0.0302451
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.809
ELB improved by 0.0271808
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.784
ELB improved by 0.024654
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.761
ELB improved by 0.0226298
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.74
ELB improved by 0.021118
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.72
ELB improved by 0.020175
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.7
ELB improved by 0.0199352
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.68
ELB improved by 0.0206868
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.657
ELB improved by 0.02303
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.628
ELB improved by 0.0282008
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.59
ELB improved by 0.0386505
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.531
ELB improved by 0.0585167
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.44
ELB improved by 0.0910746
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.314
ELB improved by 0.126521
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.179
ELB improved by 0.13441
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.075
ELB improved by 0.104485
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.009
ELB improved by 0.0659354
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.97
ELB improved by 0.0387677
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.947
ELB improved by 0.0230389
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.933
ELB improved by 0.0142915
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.923
ELB improved by 0.00937698
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
0.768 0.054 0.820
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.029 | 0.004 | 0.033 | |
| getPIPs | 0.027 | 0.004 | 0.031 | |
| graper | 0.044 | 0.006 | 0.049 | |
| makeExampleData | 0.004 | 0.000 | 0.004 | |
| makeExampleDataWithUnequalGroups | 0.012 | 0.001 | 0.013 | |
| plotELBO | 0.081 | 0.006 | 0.086 | |
| plotGroupPenalties | 0.220 | 0.006 | 0.227 | |
| plotPosterior | 0.174 | 0.006 | 0.181 | |
| predict.graper | 0.964 | 0.016 | 0.989 | |
| print.graper | 0.025 | 0.003 | 0.028 | |