Multiple platform build/check report for BioC 3.20 - INSTALL results for MassSpecWavelet on kunpeng2

Hostname	OS	Arch (*)	R version	Installed pkgs
teran2	Linux (Ubuntu 24.04.1 LTS)	x86_64	4.4.2 (2024-10-31) -- "Pile of Leaves"	4481
nebbiolo2	Linux (Ubuntu 24.04.1 LTS)	x86_64	4.4.2 (2024-10-31) -- "Pile of Leaves"	4479
palomino8	Windows Server 2022 Datacenter	x64	4.4.2 (2024-10-31 ucrt) -- "Pile of Leaves"	4359
lconway	macOS 12.7.1 Monterey	x86_64	4.4.1 (2024-06-14) -- "Race for Your Life"	4539
kunpeng2	Linux (openEuler 22.03 LTS-SP1)	aarch64	4.4.1 (2024-06-14) -- "Race for Your Life"	4493
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

INSTALL results for MassSpecWavelet on kunpeng2

To the developers/maintainers of the MassSpecWavelet package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MassSpecWavelet.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.
- See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host.

raw results

Summary

Package: MassSpecWavelet

Version: 1.72.0

Command: /home/biocbuild/R/R/bin/R CMD INSTALL MassSpecWavelet

StartedAt: 2024-11-19 20:26:24 -0000 (Tue, 19 Nov 2024)

EndedAt: 2024-11-19 20:26:34 -0000 (Tue, 19 Nov 2024)

EllapsedTime: 9.7 seconds

RetCode: 0

Status: OK

Command output

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###
### Running command:
###
###   /home/biocbuild/R/R/bin/R CMD INSTALL MassSpecWavelet
###
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* installing to library ‘/home/biocbuild/R/R-4.4.1/site-library’
* installing *source* package ‘MassSpecWavelet’ ...
** using staged installation
** libs
using C compiler: ‘gcc (conda-forge gcc 14.2.0-1) 14.2.0’
gcc -I"/home/biocbuild/R/R-4.4.1/include" -DNDEBUG   -I/usr/local/include    -fPIC  -g -O2  -Wall -c find_local_maximum.c -o find_local_maximum.o
find_local_maximum.c: In function 'localMaximumSlidingWindow':
find_local_maximum.c:471:17: warning: 'kmax' may be used uninitialized [-Wmaybe-uninitialized]
  471 |             outi[kmax] = 1;
      |                 ^
find_local_maximum.c:461:13: note: 'kmax' was declared here
  461 |         int kmax;
      |             ^~~~
find_local_maximum.c:493:17: warning: 'kmax' may be used uninitialized [-Wmaybe-uninitialized]
  493 |             outi[kmax] = 1;
      |                 ^
find_local_maximum.c:479:13: note: 'kmax' was declared here
  479 |         int kmax;
      |             ^~~~
gcc -I"/home/biocbuild/R/R-4.4.1/include" -DNDEBUG   -I/usr/local/include    -fPIC  -g -O2  -Wall -c init.c -o init.o
gcc -shared -L/home/biocbuild/R/R-4.4.1/lib -L/usr/local/lib -o MassSpecWavelet.so find_local_maximum.o init.o -L/home/biocbuild/R/R-4.4.1/lib -lR
installing to /home/biocbuild/R/R-4.4.1/site-library/00LOCK-MassSpecWavelet/00new/MassSpecWavelet/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (MassSpecWavelet)