Lydia King
| Snapshot Date: 2024-06-09 14:00 -0400 (Sun, 09 Jun 2024) |
| git_url: https://git.bioconductor.org/packages/GNOSIS |
| git_branch: devel |
| git_last_commit: c79d867 |
| git_last_commit_date: 2024-04-30 11:52:40 -0400 (Tue, 30 Apr 2024) |
| Back to Multiple platform build/check report for BioC 3.20: simplified long |
|
This page was generated on 2024-06-11 15:40 -0400 (Tue, 11 Jun 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.0 RC (2024-04-16 r86468) -- "Puppy Cup" | 4679 |
| palomino4 | Windows Server 2022 Datacenter | x64 | 4.4.0 RC (2024-04-16 r86468 ucrt) -- "Puppy Cup" | 4414 |
| merida1 | macOS 12.7.4 Monterey | x86_64 | 4.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup" | 4441 |
| kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup" | 4394 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 864/2239 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| GNOSIS 1.3.0 (landing page) Lydia King
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| palomino4 | Windows Server 2022 Datacenter / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 12.7.4 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | OK | WARNINGS | OK | | ||||||||
|
To the developers/maintainers of the GNOSIS package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GNOSIS.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: GNOSIS |
| Version: 1.3.0 |
| Command: rm -rf GNOSIS.buildbin-libdir && mkdir GNOSIS.buildbin-libdir && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD INSTALL --build --library=GNOSIS.buildbin-libdir GNOSIS_1.3.0.tar.gz |
| StartedAt: 2024-06-10 13:47:39 -0400 (Mon, 10 Jun 2024) |
| EndedAt: 2024-06-10 13:51:47 -0400 (Mon, 10 Jun 2024) |
| EllapsedTime: 248.1 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: GNOSIS_1.3.0.zip |
| PackageFileSize: 2.526 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf GNOSIS.buildbin-libdir && mkdir GNOSIS.buildbin-libdir && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD INSTALL --build --library=GNOSIS.buildbin-libdir GNOSIS_1.3.0.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'GNOSIS' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading Warning: replacing previous import 'shinydashboard::taskItem' by 'shinydashboardPlus::taskItem' when loading 'GNOSIS' Warning: replacing previous import 'shinydashboard::dashboardHeader' by 'shinydashboardPlus::dashboardHeader' when loading 'GNOSIS' Warning: replacing previous import 'shinydashboard::box' by 'shinydashboardPlus::box' when loading 'GNOSIS' Warning: replacing previous import 'shinydashboard::messageItem' by 'shinydashboardPlus::messageItem' when loading 'GNOSIS' Warning: replacing previous import 'shinydashboard::dashboardSidebar' by 'shinydashboardPlus::dashboardSidebar' when loading 'GNOSIS' Warning: replacing previous import 'shinydashboard::dashboardPage' by 'shinydashboardPlus::dashboardPage' when loading 'GNOSIS' Warning: replacing previous import 'shinyWidgets::progressBar' by 'shinydashboardPlus::progressBar' when loading 'GNOSIS' Warning: replacing previous import 'shinydashboard::notificationItem' by 'shinydashboardPlus::notificationItem' when loading 'GNOSIS' Warning: replacing previous import 'shiny::dataTableOutput' by 'DT::dataTableOutput' when loading 'GNOSIS' Warning: replacing previous import 'shiny::renderDataTable' by 'DT::renderDataTable' when loading 'GNOSIS' ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: replacing previous import 'shinydashboard::taskItem' by 'shinydashboardPlus::taskItem' when loading 'GNOSIS' Warning: replacing previous import 'shinydashboard::dashboardHeader' by 'shinydashboardPlus::dashboardHeader' when loading 'GNOSIS' Warning: replacing previous import 'shinydashboard::box' by 'shinydashboardPlus::box' when loading 'GNOSIS' Warning: replacing previous import 'shinydashboard::messageItem' by 'shinydashboardPlus::messageItem' when loading 'GNOSIS' Warning: replacing previous import 'shinydashboard::dashboardSidebar' by 'shinydashboardPlus::dashboardSidebar' when loading 'GNOSIS' Warning: replacing previous import 'shinydashboard::dashboardPage' by 'shinydashboardPlus::dashboardPage' when loading 'GNOSIS' Warning: replacing previous import 'shinyWidgets::progressBar' by 'shinydashboardPlus::progressBar' when loading 'GNOSIS' Warning: replacing previous import 'shinydashboard::notificationItem' by 'shinydashboardPlus::notificationItem' when loading 'GNOSIS' Warning: replacing previous import 'shiny::dataTableOutput' by 'DT::dataTableOutput' when loading 'GNOSIS' Warning: replacing previous import 'shiny::renderDataTable' by 'DT::renderDataTable' when loading 'GNOSIS' ** testing if installed package can be loaded from final location Warning: replacing previous import 'shinydashboard::taskItem' by 'shinydashboardPlus::taskItem' when loading 'GNOSIS' Warning: replacing previous import 'shinydashboard::dashboardHeader' by 'shinydashboardPlus::dashboardHeader' when loading 'GNOSIS' Warning: replacing previous import 'shinydashboard::box' by 'shinydashboardPlus::box' when loading 'GNOSIS' Warning: replacing previous import 'shinydashboard::messageItem' by 'shinydashboardPlus::messageItem' when loading 'GNOSIS' Warning: replacing previous import 'shinydashboard::dashboardSidebar' by 'shinydashboardPlus::dashboardSidebar' when loading 'GNOSIS' Warning: replacing previous import 'shinydashboard::dashboardPage' by 'shinydashboardPlus::dashboardPage' when loading 'GNOSIS' Warning: replacing previous import 'shinyWidgets::progressBar' by 'shinydashboardPlus::progressBar' when loading 'GNOSIS' Warning: replacing previous import 'shinydashboard::notificationItem' by 'shinydashboardPlus::notificationItem' when loading 'GNOSIS' Warning: replacing previous import 'shiny::dataTableOutput' by 'DT::dataTableOutput' when loading 'GNOSIS' Warning: replacing previous import 'shiny::renderDataTable' by 'DT::renderDataTable' when loading 'GNOSIS' ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'GNOSIS' as GNOSIS_1.3.0.zip * DONE (GNOSIS)