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###
### Running command:
###
###   chmod a+r DeepTarget -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data DeepTarget
###
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* checking for file 'DeepTarget/DESCRIPTION' ... OK
* preparing 'DeepTarget':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'DeepTarget_Vignette.Rmd' using rmarkdown
Warning in gzfile(file, "wb") :
  cannot open compressed file 'DeepTarget_Vignette_cache/html/Computing a correlation between the every gene crispr KO vs each drug response for all interesting drugs_a1f98371e7b932e3338e913fca68ef40.RData', probable reason 'No such file or directory'

Quitting from DeepTarget_Vignette.Rmd:90-101 [Computing a correlation between the every gene crispr KO vs each drug response for all interesting drugs]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `gzfile()`:
! cannot open the connection
---
Backtrace:
     ▆
  1. └─tools::buildVignettes(dir = ".", tangle = TRUE)
  2.   ├─base::tryCatch(...)
  3.   │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
  4.   │   └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
  5.   │     └─base (local) doTryCatch(return(expr), name, parentenv, handler)
  6.   └─engine$weave(file, quiet = quiet, encoding = enc)
  7.     └─knitr:::vweave_rmarkdown(...)
  8.       └─rmarkdown::render(...)
  9.         └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
 10.           └─knitr:::process_file(text, output)
 11.             ├─xfun:::handle_error(...)
 12.             ├─base::withCallingHandlers(...)
 13.             └─knitr:::process_group(group)
 14.               └─knitr:::call_block(x)
 15.                 └─knitr:::block_exec(params)
 16.                   └─knitr:::eng_r(options)
 17.                     └─knitr:::block_cache(options, output, objs)
 18.                       └─cache$save(objects, outname, hash, lazy = options$cache.lazy)
 19.                         └─base::save(...)
 20.                           └─base::gzfile(file, "wb")
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'DeepTarget_Vignette.Rmd' failed with diagnostics:
cannot open the connection
--- failed re-building 'DeepTarget_Vignette.Rmd'

SUMMARY: processing the following file failed:
  'DeepTarget_Vignette.Rmd'

Error: Vignette re-building failed.
Execution halted