Yuriy Gusev
| Snapshot Date: 2025-03-06 13:00 -0500 (Thu, 06 Mar 2025) |
| git_url: https://git.bioconductor.org/packages/CINdex |
| git_branch: RELEASE_3_20 |
| git_last_commit: fad024a |
| git_last_commit_date: 2024-10-29 10:09:24 -0500 (Tue, 29 Oct 2024) |
| Back to Multiple platform build/check report for BioC 3.20: simplified long |
|
This page was generated on 2025-03-10 12:06 -0400 (Mon, 10 Mar 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.3 (2025-02-28) -- "Trophy Case" | 4670 |
| palomino8 | Windows Server 2022 Datacenter | x64 | 4.4.3 (2025-02-28 ucrt) -- "Trophy Case" | 4355 |
| merida1 | macOS 12.7.5 Monterey | x86_64 | 4.4.3 (2025-02-28) -- "Trophy Case" | 4446 |
| kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.4.3 (2025-02-28) -- "Trophy Case" | 4439 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.4.3 (2025-02-28) -- "Trophy Case" | 4306 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 354/2289 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| CINdex 1.34.0 (landing page) Yuriy Gusev
| nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| palomino8 | Windows Server 2022 Datacenter / x64 | OK | ERROR | skipped | skipped | |||||||||
| merida1 | macOS 12.7.5 Monterey / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | ERROR | skipped | skipped | |||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | ERROR | skipped | ||||||||||
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To the developers/maintainers of the CINdex package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CINdex.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: CINdex |
| Version: 1.34.0 |
| Command: chmod a+r CINdex -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data CINdex |
| StartedAt: 2025-03-06 18:27:40 -0500 (Thu, 06 Mar 2025) |
| EndedAt: 2025-03-06 18:31:27 -0500 (Thu, 06 Mar 2025) |
| EllapsedTime: 227.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r CINdex -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data CINdex ### ############################################################################## ############################################################################## * checking for file 'CINdex/DESCRIPTION' ... OK * preparing 'CINdex': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'HowToDownloadCytobandInfo.Rmd' using rmarkdown --- finished re-building 'HowToDownloadCytobandInfo.Rmd' --- re-building 'PrepareInputData.Rmd' using rmarkdown Quitting from lines 33-45 [unnamed-chunk-1] (PrepareInputData.Rmd) Error: processing vignette 'PrepareInputData.Rmd' failed with diagnostics: there is no package called 'pd.genomewidesnp.6' --- failed re-building 'PrepareInputData.Rmd' --- re-building 'CINdex.Rnw' using knitr --- finished re-building 'CINdex.Rnw' SUMMARY: processing the following file failed: 'PrepareInputData.Rmd' Error: Vignette re-building failed. Execution halted