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BioC 3.2: INSTALL report for SomaticSignatures on moscato1

This page was generated on 2016-04-23 10:19:58 -0700 (Sat, 23 Apr 2016).

Package 998/1103HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SomaticSignatures 2.6.1
Julian Gehring
Snapshot Date: 2016-04-22 16:20:12 -0700 (Fri, 22 Apr 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/SomaticSignatures
Last Changed Rev: 116064 / Revision: 116712
Last Changed Date: 2016-04-10 02:13:40 -0700 (Sun, 10 Apr 2016)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: SomaticSignatures
Version: 2.6.1
Command: rm -rf SomaticSignatures.buildbin-libdir && mkdir SomaticSignatures.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.2/bioc/src/contrib/SomaticSignatures_2.6.1.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --library=SomaticSignatures.buildbin-libdir --merge-multiarch SomaticSignatures_2.6.1.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL SomaticSignatures_2.6.1.zip && rm SomaticSignatures_2.6.1.tar.gz SomaticSignatures_2.6.1.zip
StartedAt: 2016-04-22 18:39:35 -0700 (Fri, 22 Apr 2016)
EndedAt: 2016-04-22 18:41:32 -0700 (Fri, 22 Apr 2016)
EllapsedTime: 117.2 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   rm -rf SomaticSignatures.buildbin-libdir && mkdir SomaticSignatures.buildbin-libdir  && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.2/bioc/src/contrib/SomaticSignatures_2.6.1.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --library=SomaticSignatures.buildbin-libdir --merge-multiarch SomaticSignatures_2.6.1.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL SomaticSignatures_2.6.1.zip  && rm SomaticSignatures_2.6.1.tar.gz SomaticSignatures_2.6.1.zip
###
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##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  104k  100  104k    0     0  9069k      0 --:--:-- --:--:-- --:--:-- 12.7M

install for i386

* installing *source* package 'SomaticSignatures' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'ggplot2::Position' by 'BiocGenerics::Position' when loading 'ggbio'
** help
*** installing help indices
** building package indices
** installing vignettes
   'SomaticSignatures-vignette.Rhtml' 
** testing if installed package can be loaded
Warning: replacing previous import 'ggplot2::Position' by 'BiocGenerics::Position' when loading 'ggbio'

install for x64

* installing *source* package 'SomaticSignatures' ...
** testing if installed package can be loaded
Warning: replacing previous import 'ggplot2::Position' by 'BiocGenerics::Position' when loading 'ggbio'
* MD5 sums
packaged installation of 'SomaticSignatures' as SomaticSignatures_2.6.1.zip
* DONE (SomaticSignatures)
* installing to library 'D:/biocbld/bbs-3.2-bioc/R/library'
package 'SomaticSignatures' successfully unpacked and MD5 sums checked