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BioC 3.2: BUILD BIN report for SGSeq on moscato1

This page was generated on 2016-04-23 10:20:58 -0700 (Sat, 23 Apr 2016).

Package 964/1103HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SGSeq 1.4.3
Leonard Goldstein
Snapshot Date: 2016-04-22 16:20:12 -0700 (Fri, 22 Apr 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/SGSeq
Last Changed Rev: 113779 / Revision: 116712
Last Changed Date: 2016-02-18 14:43:24 -0800 (Thu, 18 Feb 2016)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  OK UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64  NotNeeded  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: SGSeq
Version: 1.4.3
Command: cd SGSeq.buildbin-libdir/SGSeq && zip -r ../../SGSeq_1.4.3.zip . & cd ../..
StartedAt: 2016-04-23 09:50:01 -0700 (Sat, 23 Apr 2016)
EndedAt: 2016-04-23 09:50:20 -0700 (Sat, 23 Apr 2016)
EllapsedTime: 19.5 seconds
RetCode: 0
Status:  OK  
PackageFile: SGSeq_1.4.3.zip
PackageFileSize: 2.131 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   cd SGSeq.buildbin-libdir/SGSeq && zip -r ../../SGSeq_1.4.3.zip . & cd ../..
###
##############################################################################
##############################################################################


  adding: data/ (208 bytes security) (stored 0%)
  adding: data/Rdata.rdb (188 bytes security) (deflated 31%)
  adding: data/Rdata.rds (188 bytes security) (stored 0%)
  adding: data/Rdata.rdx (188 bytes security) (stored 0%)
  adding: DESCRIPTION (188 bytes security) (deflated 40%)
  adding: doc/ (208 bytes security) (stored 0%)
  adding: doc/index.html (188 bytes security) (deflated 57%)
  adding: doc/SGSeq.html (188 bytes security) (deflated 56%)
  adding: doc/SGSeq.Rmd (188 bytes security) (deflated 68%)
  adding: extdata/ (208 bytes security) (stored 0%)
  adding: extdata/bams/ (208 bytes security) (stored 0%)
  adding: extdata/bams/N1.bam (188 bytes security) (deflated 0%)
  adding: extdata/bams/N1.bam.bai (188 bytes security) (deflated 99%)
  adding: extdata/bams/N2.bam (188 bytes security) (deflated 0%)
  adding: extdata/bams/N2.bam.bai (188 bytes security) (deflated 100%)
  adding: extdata/bams/N3.bam (188 bytes security) (deflated 0%)
  adding: extdata/bams/N3.bam.bai (188 bytes security) (deflated 99%)
  adding: extdata/bams/N4.bam (188 bytes security) (deflated 0%)
  adding: extdata/bams/N4.bam.bai (188 bytes security) (deflated 100%)
  adding: extdata/bams/T1.bam (188 bytes security) (deflated 0%)
  adding: extdata/bams/T1.bam.bai (188 bytes security) (deflated 100%)
  adding: extdata/bams/T2.bam (188 bytes security) (deflated 0%)
  adding: extdata/bams/T2.bam.bai (188 bytes security) (deflated 99%)
  adding: extdata/bams/T3.bam (188 bytes security) (deflated 0%)
  adding: extdata/bams/T3.bam.bai (188 bytes security) (deflated 99%)
  adding: extdata/bams/T4.bam (188 bytes security) (deflated 0%)
  adding: extdata/bams/T4.bam.bai (188 bytes security) (deflated 100%)
  adding: help/ (208 bytes security) (stored 0%)
  adding: help/aliases.rds (188 bytes security) (stored 0%)
  adding: help/AnIndex (188 bytes security) (deflated 83%)
  adding: help/paths.rds (188 bytes security) (stored 0%)
  adding: help/SGSeq.rdb (188 bytes security) (deflated 2%)
  adding: help/SGSeq.rdx (188 bytes security) (stored 0%)
  adding: html/ (208 bytes security) (stored 0%)
  adding: html/00Index.html (188 bytes security) (deflated 90%)
  adding: html/R.css (188 bytes security) (deflated 75%)
  adding: INDEX (188 bytes security) (deflated 71%)
  adding: MD5 (188 bytes security) (deflated 50%)
  adding: Meta/ (208 bytes security) (stored 0%)
  adding: Meta/data.rds (188 bytes security) (stored 0%)
  adding: Meta/hsearch.rds (188 bytes security) (stored 0%)
  adding: Meta/links.rds (188 bytes security) (stored 0%)
  adding: Meta/nsInfo.rds (188 bytes security) (stored 0%)
  adding: Meta/package.rds (188 bytes security) (stored 0%)
  adding: Meta/Rd.rds (188 bytes security) (stored 0%)
  adding: Meta/vignette.rds (188 bytes security) (stored 0%)
  adding: NAMESPACE (188 bytes security) (deflated 63%)
  adding: NEWS (188 bytes security) (deflated 57%)
  adding: R/ (208 bytes security) (stored 0%)
  adding: R/SGSeq (188 bytes security) (deflated 41%)
  adding: R/SGSeq.rdb (188 bytes security) (deflated 21%)
  adding: R/SGSeq.rdx (188 bytes security) (deflated 1%)
  adding: scripts/ (208 bytes security) (stored 0%)
  adding: scripts/createExampleData.R (188 bytes security) (deflated 66%)
  adding: unitTests/ (208 bytes security) (stored 0%)
  adding: unitTests/test_analyzeFeatures.R (188 bytes security) (deflated 31%)
  adding: unitTests/test_analyzeVariants.R (188 bytes security) (deflated 21%)
  adding: unitTests/test_annotate.R (188 bytes security) (deflated 49%)
  adding: unitTests/test_classes.R (188 bytes security) (deflated 71%)
  adding: unitTests/test_convertToSGFeatures.R (188 bytes security) (deflated 25%)
  adding: unitTests/test_convertToTxFeatures.R (188 bytes security) (deflated 42%)
  adding: unitTests/test_findSGVariants.R (188 bytes security) (deflated 24%)
  adding: unitTests/test_getBamInfo.R (188 bytes security) (deflated 37%)
  adding: unitTests/test_getSGFeatureCounts.R (188 bytes security) (deflated 33%)
  adding: unitTests/test_getSGVariantCounts.R (188 bytes security) (deflated 58%)
  adding: unitTests/test_mergeTxFeatures.R (188 bytes security) (deflated 36%)
  adding: unitTests/test_predictTxFeatures.R (188 bytes security) (deflated 30%)
  adding: unitTests/test_predictVariantEffects.R (188 bytes security) (deflated 72%)