BioC 3.2: INSTALL report for ReportingTools on oaxaca

Package: ReportingTools

Version: 2.10.0

Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL ReportingTools

StartedAt: 2016-04-22 17:27:18 -0700 (Fri, 22 Apr 2016)

EndedAt: 2016-04-22 17:28:03 -0700 (Fri, 22 Apr 2016)

EllapsedTime: 45.0 seconds

RetCode: 0

Status:  OK

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### Running command:
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###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL ReportingTools
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* installing to library ‘/Library/Frameworks/R.framework/Versions/3.2/Resources/library’
* installing *source* package ‘ReportingTools’ ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import ‘ggplot2::Position’ by ‘BiocGenerics::Position’ when loading ‘ggbio’
in method for ‘objectToHTML’ with signature ‘object="ggbio"’: no definition for class “ggbio”
Note: no visible binding for '<<-' assignment to '.reportDirectory' 
Note: no visible binding for '<<-' assignment to '.reportDirectory' 
** help
*** installing help indices
** building package indices
** installing vignettes
   ‘basicReportingTools.Rnw’ 
   ‘microarrayAnalysis.Rnw’ 
   ‘rnaseqAnalysis.Rnw’ 
   ‘shiny.Rnw’ 
   ‘knitr.Rmd’ 
** testing if installed package can be loaded
Warning: replacing previous import ‘ggplot2::Position’ by ‘BiocGenerics::Position’ when loading ‘ggbio’
* DONE (ReportingTools)