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BioC 3.2: INSTALL report for BiocStyle on moscato1

This page was generated on 2016-04-23 10:19:27 -0700 (Sat, 23 Apr 2016).

Package 101/1103HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BiocStyle 1.8.0
Bioconductor Package Maintainer
Snapshot Date: 2016-04-22 16:20:12 -0700 (Fri, 22 Apr 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/BiocStyle
Last Changed Rev: 109589 / Revision: 116712
Last Changed Date: 2015-10-13 12:36:05 -0700 (Tue, 13 Oct 2015)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: BiocStyle
Version: 1.8.0
Command: rm -rf BiocStyle.buildbin-libdir && mkdir BiocStyle.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.2/bioc/src/contrib/BiocStyle_1.8.0.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --library=BiocStyle.buildbin-libdir --merge-multiarch BiocStyle_1.8.0.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL BiocStyle_1.8.0.zip && rm BiocStyle_1.8.0.tar.gz BiocStyle_1.8.0.zip
StartedAt: 2016-04-22 17:37:24 -0700 (Fri, 22 Apr 2016)
EndedAt: 2016-04-22 17:38:24 -0700 (Fri, 22 Apr 2016)
EllapsedTime: 59.7 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf BiocStyle.buildbin-libdir && mkdir BiocStyle.buildbin-libdir  && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.2/bioc/src/contrib/BiocStyle_1.8.0.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --library=BiocStyle.buildbin-libdir --merge-multiarch BiocStyle_1.8.0.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL BiocStyle_1.8.0.zip  && rm BiocStyle_1.8.0.tar.gz BiocStyle_1.8.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 27797  100 27797    0     0  6149k      0 --:--:-- --:--:-- --:--:-- 26.5M

install for i386

Warning in untar2(tarfile, files, list, exdir, restore_times) :
  failed to copy 'BiocStyle/vignettes/../inst/rmarkdown/templates/html_document/skeleton/skeleton.Rmd' to 'BiocStyle/vignettes/HtmlStyle.Rmd'
* installing *source* package 'BiocStyle' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

Warning in untar2(tarfile, files, list, exdir, restore_times) :
  failed to copy 'BiocStyle/vignettes/../inst/rmarkdown/templates/html_document/skeleton/skeleton.Rmd' to 'BiocStyle/vignettes/HtmlStyle.Rmd'
* installing *source* package 'BiocStyle' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BiocStyle' as BiocStyle_1.8.0.zip
* DONE (BiocStyle)
* installing to library 'D:/biocbld/bbs-3.2-bioc/R/library'
package 'BiocStyle' successfully unpacked and MD5 sums checked