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BioC 3.2: INSTALL report for BSgenome on moscato1

This page was generated on 2016-04-23 10:15:59 -0700 (Sat, 23 Apr 2016).

Package 124/1103HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BSgenome 1.38.0
H. Pages
Snapshot Date: 2016-04-22 16:20:12 -0700 (Fri, 22 Apr 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/BSgenome
Last Changed Rev: 109589 / Revision: 116712
Last Changed Date: 2015-10-13 12:36:05 -0700 (Tue, 13 Oct 2015)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: BSgenome
Version: 1.38.0
Command: rm -rf BSgenome.buildbin-libdir && mkdir BSgenome.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.2/bioc/src/contrib/BSgenome_1.38.0.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --library=BSgenome.buildbin-libdir --merge-multiarch BSgenome_1.38.0.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL BSgenome_1.38.0.zip && rm BSgenome_1.38.0.tar.gz BSgenome_1.38.0.zip
StartedAt: 2016-04-22 18:25:40 -0700 (Fri, 22 Apr 2016)
EndedAt: 2016-04-22 18:29:42 -0700 (Fri, 22 Apr 2016)
EllapsedTime: 241.6 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   rm -rf BSgenome.buildbin-libdir && mkdir BSgenome.buildbin-libdir  && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.2/bioc/src/contrib/BSgenome_1.38.0.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --library=BSgenome.buildbin-libdir --merge-multiarch BSgenome_1.38.0.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL BSgenome_1.38.0.zip  && rm BSgenome_1.38.0.tar.gz BSgenome_1.38.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 5466k  100 5466k    0     0  85.2M      0 --:--:-- --:--:-- --:--:-- 92.0M

install for i386

* installing *source* package 'BSgenome' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'BSgenome' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BSgenome' as BSgenome_1.38.0.zip
* DONE (BSgenome)
* installing to library 'D:/biocbld/bbs-3.2-bioc/R/library'
package 'BSgenome' successfully unpacked and MD5 sums checked