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BioC 3.2: BUILD report for rCGH on windows1.bioconductor.org

This page was generated on 2015-10-27 17:32:24 -0400 (Tue, 27 Oct 2015).

Package 851/1104HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
rCGH 1.0.1
Frederic Commo
Snapshot Date: 2015-10-26 19:24:07 -0400 (Mon, 26 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/rCGH
Last Changed Rev: 109889 / Revision: 109947
Last Changed Date: 2015-10-24 14:27:13 -0400 (Sat, 24 Oct 2015)
linux1.bioconductor.org Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  ERROR  skipped 
windows1.bioconductor.org Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64  NotNeeded [ ERROR ] skipped  skipped 
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  NotNeeded  ERROR  skipped  skipped 
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  ERROR  skipped  skipped 

Summary

Package: rCGH
Version: 1.0.1
Command: chmod a+r rCGH -R && C:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data rCGH
StartedAt: 2015-10-26 22:52:03 -0400 (Mon, 26 Oct 2015)
EndedAt: 2015-10-26 22:52:18 -0400 (Mon, 26 Oct 2015)
EllapsedTime: 15.5 seconds
RetCode: 1
Status:  ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r rCGH -R && C:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data rCGH
###
##############################################################################
##############################################################################


* checking for file 'rCGH/DESCRIPTION' ... OK
* preparing 'rCGH':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
Warning: running command '"C:/biocbld/bbs-3.2-bioc/R/bin/x64/Rcmd.exe" INSTALL -l "C:\biocbld\bbs-3.2-bioc\tmpdir\RtmpSYjgoQ\Rinste5c1a755ad5" --no-multiarch "C:/biocbld/bbs-3.2-bioc/tmpdir/RtmpSYjgoQ/Rbuilde5c203a5c03/rCGH"' had status 1
      -----------------------------------
* installing *source* package 'rCGH' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
Warning: replacing previous import by 'stats::heatmap' when loading 'rCGH'
Error in newGRanges("GRanges", seqnames = seqnames, ranges = ranges, strand = strand,  : 
  could not find function "IRanges"
Error : unable to load R code in package 'rCGH'
ERROR: lazy loading failed for package 'rCGH'
* removing 'C:/biocbld/bbs-3.2-bioc/tmpdir/RtmpSYjgoQ/Rinste5c1a755ad5/rCGH'
      -----------------------------------
ERROR: package installation failed