Back to the "Multiple platform build/check report" A  B  C  D  E [F] G  H  I  J  K  L  M  N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

BioC 3.2: INSTALL report for flowType on moscato1

This page was generated on 2015-08-20 13:20:17 -0700 (Thu, 20 Aug 2015).

Package 361/1069HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
flowType 2.7.0
Nima Aghaeepour
Snapshot Date: 2015-08-19 16:24:33 -0700 (Wed, 19 Aug 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/flowType
Last Changed Rev: 104490 / Revision: 107602
Last Changed Date: 2015-06-02 18:04:04 -0700 (Tue, 02 Jun 2015)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 [ OK ] ERROR  skipped  skipped 
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: flowType
Version: 2.7.0
Command: C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.2/bioc/src/contrib/flowType_2.7.0.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch flowType_2.7.0.tar.gz && rm flowType_2.7.0.tar.gz
StartedAt: 2015-08-19 19:02:11 -0700 (Wed, 19 Aug 2015)
EndedAt: 2015-08-19 19:04:01 -0700 (Wed, 19 Aug 2015)
EllapsedTime: 110.3 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.2/bioc/src/contrib/flowType_2.7.0.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch flowType_2.7.0.tar.gz && rm flowType_2.7.0.tar.gz
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  845k  100  845k    0     0  31.4M      0 --:--:-- --:--:-- --:--:-- 45.8M

install for i386

* installing to library 'D:/biocbld/bbs-3.2-bioc/R/library'
* installing *source* package 'flowType' ...
** libs
g++ -m32 -I"D:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG    -I"D:/biocbld/bbs-3.2-bioc/R/library/Rcpp/include" -I"D:/biocbld/bbs-3.2-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c countsAndMeans.cpp -o countsAndMeans.o
g++ -m32 -I"D:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG    -I"D:/biocbld/bbs-3.2-bioc/R/library/Rcpp/include" -I"D:/biocbld/bbs-3.2-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c flowType.cpp -o flowType.o
g++ -m32 -I"D:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG    -I"D:/biocbld/bbs-3.2-bioc/R/library/Rcpp/include" -I"D:/biocbld/bbs-3.2-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c numberGenerator.cpp -o numberGenerator.o
g++ -m32 -shared -s -static-libgcc -o flowType.dll tmp.def countsAndMeans.o flowType.o numberGenerator.o -Ld:/RCompile/r-compiling/local/local320/lib/i386 -Ld:/RCompile/r-compiling/local/local320/lib -LD:/biocbld/BBS-3˜1.2-B/R/bin/i386 -lR
installing to D:/biocbld/bbs-3.2-bioc/R/library/flowType/libs/i386
** R
** data
** inst
** preparing package for lazy loading
Creating a generic function for 'summary' from package 'base' in package 'flowType'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing to library 'D:/biocbld/bbs-3.2-bioc/R/library'
* installing *source* package 'flowType' ...
** libs
g++ -m64 -I"D:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG    -I"D:/biocbld/bbs-3.2-bioc/R/library/Rcpp/include" -I"D:/biocbld/bbs-3.2-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c countsAndMeans.cpp -o countsAndMeans.o
g++ -m64 -I"D:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG    -I"D:/biocbld/bbs-3.2-bioc/R/library/Rcpp/include" -I"D:/biocbld/bbs-3.2-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c flowType.cpp -o flowType.o
g++ -m64 -I"D:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG    -I"D:/biocbld/bbs-3.2-bioc/R/library/Rcpp/include" -I"D:/biocbld/bbs-3.2-bioc/R/library/BH/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c numberGenerator.cpp -o numberGenerator.o
g++ -m64 -shared -s -static-libgcc -o flowType.dll tmp.def countsAndMeans.o flowType.o numberGenerator.o -Ld:/RCompile/r-compiling/local/local320/lib/x64 -Ld:/RCompile/r-compiling/local/local320/lib -LD:/biocbld/BBS-3˜1.2-B/R/bin/x64 -lR
installing to D:/biocbld/bbs-3.2-bioc/R/library/flowType/libs/x64
** testing if installed package can be loaded
* DONE (flowType)