deepSNV 1.16.0 Moritz Gerstung
Snapshot Date: 2015-10-26 19:24:07 -0400 (Mon, 26 Oct 2015) | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/deepSNV | Last Changed Rev: 109589 / Revision: 109947 | Last Changed Date: 2015-10-13 15:36:05 -0400 (Tue, 13 Oct 2015) |
| linux1.bioconductor.org | Linux (Ubuntu 14.04.2 LTS) / x86_64 | OK | OK | OK | | |
windows1.bioconductor.org | Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64 | OK | OK | OK | [ OK ] | |
perceval | Mac OS X Snow Leopard (10.6.8) / x86_64 | OK | OK | OK | OK | |
oaxaca | Mac OS X Mavericks (10.9.5) / x86_64 | OK | OK | OK | OK | |
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### Running command:
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### cd deepSNV.buildbin-libdir/deepSNV && zip -r ../../deepSNV_1.16.0.zip . & cd ../..
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adding: CITATION (188 bytes security) (deflated 59%)
adding: data/ (208 bytes security) (stored 0%)
adding: data/counts.RData (188 bytes security) (stored 0%)
adding: data/HIVmix.RData (188 bytes security) (deflated 8%)
adding: data/phiX.RData (188 bytes security) (deflated 4%)
adding: data/pi.RData (188 bytes security) (deflated 6%)
adding: data/RCC.RData (188 bytes security) (deflated 5%)
adding: data/trueSNVs.RData (188 bytes security) (stored 0%)
adding: DESCRIPTION (188 bytes security) (deflated 45%)
adding: doc/ (208 bytes security) (stored 0%)
adding: doc/deepSNV.pdf (188 bytes security) (deflated 17%)
adding: doc/deepSNV.Rnw (188 bytes security) (deflated 58%)
adding: doc/index.html (188 bytes security) (deflated 69%)
adding: doc/shearwater.pdf (188 bytes security) (deflated 28%)
adding: doc/shearwater.Rnw (188 bytes security) (deflated 61%)
adding: doc/shearwaterML.html (188 bytes security) (deflated 54%)
adding: doc/shearwaterML.Rmd (188 bytes security) (deflated 47%)
adding: example/ (208 bytes security) (stored 0%)
adding: example/deepSNV-example.R (188 bytes security) (deflated 50%)
adding: example/shearwater-example.R (188 bytes security) (deflated 42%)
adding: extdata/ (208 bytes security) (stored 0%)
adding: extdata/control.bam (188 bytes security) (deflated 0%)
adding: extdata/control.bam.bai (188 bytes security) (deflated 61%)
adding: extdata/deepSNV.vcf (188 bytes security) (deflated 65%)
adding: extdata/shearwater.vcf (188 bytes security) (deflated 61%)
adding: extdata/shearwater2.vcf (188 bytes security) (deflated 67%)
adding: extdata/shearwaterML.vcf (188 bytes security) (deflated 66%)
adding: extdata/test.bam (188 bytes security) (deflated 0%)
adding: extdata/test.bam.bai (188 bytes security) (deflated 62%)
adding: help/ (208 bytes security) (stored 0%)
adding: help/aliases.rds (188 bytes security) (stored 0%)
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adding: help/deepSNV.rdb (188 bytes security) (deflated 2%)
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adding: html/ (208 bytes security) (stored 0%)
adding: html/00Index.html (188 bytes security) (deflated 78%)
adding: html/R.css (188 bytes security) (deflated 75%)
adding: INDEX (188 bytes security) (deflated 65%)
adding: libs/ (208 bytes security) (stored 0%)
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adding: libs/i386/deepSNV.dll (188 bytes security) (deflated 52%)
adding: libs/x64/ (208 bytes security) (stored 0%)
adding: libs/x64/deepSNV.dll (188 bytes security) (deflated 52%)
adding: MD5 (188 bytes security) (deflated 46%)
adding: Meta/ (208 bytes security) (stored 0%)
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adding: NAMESPACE (188 bytes security) (deflated 57%)
adding: NEWS (188 bytes security) (deflated 57%)
adding: R/ (208 bytes security) (stored 0%)
adding: R/deepSNV (188 bytes security) (deflated 41%)
adding: R/deepSNV.rdb (188 bytes security) (deflated 31%)
adding: R/deepSNV.rdx (188 bytes security) (stored 0%)
adding: TODO (188 bytes security) (deflated 5%)