Back to the "Multiple platform build/check report" A  B [C] D  E  F  G  H  I  J  K  L  M  N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

BioC 3.2: INSTALL report for codelink on zin1

This page was generated on 2015-08-24 10:47:05 -0700 (Mon, 24 Aug 2015).

Package 203/1071HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
codelink 1.37.6
Diego Diez
Snapshot Date: 2015-08-23 16:24:14 -0700 (Sun, 23 Aug 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/codelink
Last Changed Rev: 106726 / Revision: 107696
Last Changed Date: 2015-07-24 01:21:39 -0700 (Fri, 24 Jul 2015)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64 [ ERROR ] ERROR  skipped 
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  ERROR  ERROR  skipped  skipped 
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  ERROR  ERROR  skipped  skipped 

Summary

Package: codelink
Version: 1.37.6
Command: /home/biocbuild/bbs-3.2-bioc/R/bin/R CMD INSTALL codelink
StartedAt: 2015-08-23 17:07:07 -0700 (Sun, 23 Aug 2015)
EndedAt: 2015-08-23 17:07:09 -0700 (Sun, 23 Aug 2015)
EllapsedTime: 1.9 seconds
RetCode: 1
Status:  ERROR 

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.2-bioc/R/bin/R CMD INSTALL codelink
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.2-bioc/R/library’
* installing *source* package ‘codelink’ ...
** R
Error in parse(outFile) : 
  /home/biocbuild/bbs-3.2-bioc/meat/codelink/R/CodelinkSet-tools.R:51:1: unexpected input
50:                 stop("Ni is missing. Choose intensity Spot or Raw")
51: <<
    ^
ERROR: unable to collate and parse R files for package ‘codelink’
* removing ‘/home/biocbuild/bbs-3.2-bioc/R/library/codelink’
* restoring previous ‘/home/biocbuild/bbs-3.2-bioc/R/library/codelink’