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BioC 3.2: BUILD report for codelink on perceval

This page was generated on 2015-08-24 10:51:10 -0700 (Mon, 24 Aug 2015).

Package 203/1071HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
codelink 1.37.6
Diego Diez
Snapshot Date: 2015-08-23 16:24:14 -0700 (Sun, 23 Aug 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/codelink
Last Changed Rev: 106726 / Revision: 107696
Last Changed Date: 2015-07-24 01:21:39 -0700 (Fri, 24 Jul 2015)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  ERROR  ERROR  skipped 
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  ERROR [ ERROR ] skipped  skipped 
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  ERROR  ERROR  skipped  skipped 

Summary

Package: codelink
Version: 1.37.6
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data codelink
StartedAt: 2015-08-23 17:34:23 -0700 (Sun, 23 Aug 2015)
EndedAt: 2015-08-23 17:34:25 -0700 (Sun, 23 Aug 2015)
EllapsedTime: 2.0 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data codelink
###
##############################################################################
##############################################################################


* checking for file ‘codelink/DESCRIPTION’ ... OK
* preparing ‘codelink’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘codelink’ ...
** R
Error in parse(outFile) : 
  /private/tmp/RtmpsJ0Ewp/Rbuilda8221d28cd4b/codelink/R/CodelinkSet-tools.R:51:1: unexpected input
50:                 stop("Ni is missing. Choose intensity Spot or Raw")
51: <<
    ^
ERROR: unable to collate and parse R files for package ‘codelink’
* removing ‘/private/tmp/RtmpsJ0Ewp/Rinsta82261be05e1/codelink’
      -----------------------------------
ERROR: package installation failed