bioassayR 1.7.7 Tyler Backman
Snapshot Date: 2015-08-23 16:24:14 -0700 (Sun, 23 Aug 2015) | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/bioassayR | Last Changed Rev: 105551 / Revision: 107696 | Last Changed Date: 2015-06-26 13:16:26 -0700 (Fri, 26 Jun 2015) |
| zin1 | Linux (Ubuntu 14.04.2 LTS) / x86_64 | NotNeeded | OK | OK | |  |
perceval | Mac OS X Snow Leopard (10.6.8) / x86_64 | NotNeeded | [ ERROR ] | skipped | skipped | |
oaxaca | Mac OS X Mavericks (10.9.5) / x86_64 | NotNeeded | OK | OK | OK |  |
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### Running command:
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### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data bioassayR
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* checking for file ‘bioassayR/DESCRIPTION’ ... OK
* preparing ‘bioassayR’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
Loading required package: DBI
Loading required package: RSQLite
Loading required package: Matrix
Loading required package: rjson
Loading required package: BiocGenerics
Loading required package: parallel
Attaching package: ‘BiocGenerics’
The following objects are masked from ‘package:parallel’:
clusterApply, clusterApplyLB, clusterCall, clusterEvalQ, clusterExport,
clusterMap, parApply, parCapply, parLapply, parLapplyLB, parRapply,
parSapply, parSapplyLB
The following object is masked from ‘package:Matrix’:
as.vector
The following objects are masked from ‘package:stats’:
IQR, mad, xtabs
The following objects are masked from ‘package:base’:
anyDuplicated, append, as.data.frame, as.vector, cbind, colnames, do.call,
duplicated, eval, evalq, Filter, Find, get, grep, grepl, intersect,
is.unsorted, lapply, Map, mapply, match, mget, order, paste, pmax, pmax.int,
pmin, pmin.int, Position, rank, rbind, Reduce, rep.int, rownames, sapply,
setdiff, sort, table, tapply, union, unique, unlist, unsplit
Creating index: note this may take a long time for a large database
Creating index: note this may take a long time for a large database
Error: processing vignette 'bioassayR.Rnw' failed with diagnostics:
chunk 36
Error in function (type, msg, asError = TRUE) :
Failure when receiving data from the peer
Execution halted