Britta Velten
| Snapshot Date: 2024-05-08 14:00:19 -0400 (Wed, 08 May 2024) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_19 |
| git_last_commit: a4dfa52 |
| git_last_commit_date: 2024-04-30 11:11:42 -0400 (Tue, 30 Apr 2024) |
| Back to Multiple platform build/check report for BioC 3.19: simplified long |
|
This page was generated on 2024-05-09 11:40:55 -0400 (Thu, 09 May 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.0 (2024-04-24) -- "Puppy Cup" | 4748 |
| palomino3 | Windows Server 2022 Datacenter | x64 | 4.4.0 (2024-04-24 ucrt) -- "Puppy Cup" | 4484 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.0 (2024-04-24) -- "Puppy Cup" | 4514 |
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.4.0 beta (2024-04-15 r86425) -- "Puppy Cup" | 4480 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 908/2300 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.20.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | OK | OK | ||||||||||
| kjohnson3 | macOS 13.6.5 Ventura / arm64 | see weekly results here | ||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
| Package: graper |
| Version: 1.20.0 |
| Command: /home/biocbuild/R/R-beta-2024-04-15_r86425/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library --no-vignettes --timings graper_1.20.0.tar.gz |
| StartedAt: 2024-05-09 08:06:14 -0000 (Thu, 09 May 2024) |
| EndedAt: 2024-05-09 08:07:21 -0000 (Thu, 09 May 2024) |
| EllapsedTime: 67.2 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/R/R-beta-2024-04-15_r86425/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library --no-vignettes --timings graper_1.20.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck’
* using R version 4.4.0 beta (2024-04-15 r86425)
* using platform: aarch64-unknown-linux-gnu
* R was compiled by
gcc (GCC) 10.3.1
GNU Fortran (GCC) 10.3.1
* running under: openEuler 22.03 (LTS-SP1)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.20.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (GCC) 10.3.1’
* checking C++ specification ... NOTE
Specified C++11: please drop specification unless essential
* checking installed package size ... NOTE
installed size is 7.7Mb
sub-directories of 1Mb or more:
libs 7.5Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 4 NOTEs
See
‘/home/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/R/R-beta-2024-04-15_r86425/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################
* installing to library ‘/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 10.3.1’
using C++11
g++ -std=gnu++11 -I"/home/biocbuild/R/R-beta-2024-04-15_r86425/include" -DNDEBUG -I'/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/Rcpp/include' -I'/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/RcppArmadillo/include' -I'/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/BH/include' -I/usr/local/include -fPIC -g -O2 -Wall -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/biocbuild/R/R-beta-2024-04-15_r86425/include" -DNDEBUG -I'/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/Rcpp/include' -I'/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/RcppArmadillo/include' -I'/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/BH/include' -I/usr/local/include -fPIC -g -O2 -Wall -c fit_graper.cpp -o fit_graper.o
In file included from /home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11,
from /home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/BH/include/boost/math/special_functions/math_fwd.hpp:29,
from /home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/BH/include/boost/math/special_functions/digamma.hpp:15,
from graper_linear_dense_ff.h:2,
from fit_graper.cpp:4:
/home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/BH/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp]
23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
| ^~~~~~~
g++ -std=gnu++11 -shared -L/home/biocbuild/R/R-beta-2024-04-15_r86425/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -lopenblas -lgfortran -lm -L/home/biocbuild/R/R-beta-2024-04-15_r86425/lib -lR
installing to /home/biocbuild/R/R-beta-2024-04-15_r86425/site-library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.4.0 beta (2024-04-15 r86425) -- "Puppy Cup"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: aarch64-unknown-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-839.865
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-586.605
ELB improved by 253.26
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-526.494
ELB improved by 60.1112
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.805
ELB improved by 45.6891
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.305
ELB improved by 22.5002
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.784
ELB improved by 8.52114
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.549
ELB improved by 4.23485
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.469
ELB improved by 3.07971
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.662
ELB improved by 2.80665
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.841
ELB improved by 2.82177
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.924
ELB improved by 2.9169
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.967
ELB improved by 2.95625
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.153
ELB improved by 2.81412
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.714
ELB improved by 2.43905
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.794
ELB improved by 1.91984
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.38
ELB improved by 1.41429
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.358
ELB improved by 1.02226
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.6
ELB improved by 0.758056
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.008
ELB improved by 0.591904
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.524
ELB improved by 0.484314
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.119
ELB improved by 0.404751
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.779
ELB improved by 0.339727
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.492
ELB improved by 0.286998
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.246
ELB improved by 0.245707
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.033
ELB improved by 0.213764
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.844
ELB improved by 0.18897
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.674
ELB improved by 0.169604
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.52
ELB improved by 0.154384
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.377
ELB improved by 0.142358
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.244
ELB improved by 0.13283
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.119
ELB improved by 0.125304
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417
ELB improved by 0.119419
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.885
ELB improved by 0.114892
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.773
ELB improved by 0.111469
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.664
ELB improved by 0.108882
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.558
ELB improved by 0.106825
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.453
ELB improved by 0.10497
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.35
ELB improved by 0.103014
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.249
ELB improved by 0.100765
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.151
ELB improved by 0.0981899
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.055
ELB improved by 0.095404
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.963
ELB improved by 0.0926077
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.873
ELB improved by 0.0900127
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.785
ELB improved by 0.0877952
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.699
ELB improved by 0.0860783
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.614
ELB improved by 0.0849287
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.53
ELB improved by 0.0843533
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.445
ELB improved by 0.0842919
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.361
ELB improved by 0.0846088
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.276
ELB improved by 0.085095
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.19
ELB improved by 0.0854875
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.105
ELB improved by 0.0855065
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.02
ELB improved by 0.0849018
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.936
ELB improved by 0.0835061
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.855
ELB improved by 0.0812827
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.777
ELB improved by 0.0783419
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.702
ELB improved by 0.0749024
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.63
ELB improved by 0.0712139
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.563
ELB improved by 0.0674895
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.499
ELB improved by 0.0638783
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.439
ELB improved by 0.0604718
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.381
ELB improved by 0.0573234
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.327
ELB improved by 0.0544653
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.275
ELB improved by 0.0519206
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.225
ELB improved by 0.0497109
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.177
ELB improved by 0.0478605
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.131
ELB improved by 0.0464016
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.085
ELB improved by 0.0453791
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.041
ELB improved by 0.0448568
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.996
ELB improved by 0.0449267
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.95
ELB improved by 0.0457205
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.903
ELB improved by 0.0474258
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.852
ELB improved by 0.0503053
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.798
ELB improved by 0.0547172
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.736
ELB improved by 0.0611229
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.666
ELB improved by 0.0700529
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.584
ELB improved by 0.0819725
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.487
ELB improved by 0.0969761
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.373
ELB improved by 0.114332
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.241
ELB improved by 0.132171
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.093
ELB improved by 0.147867
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.934
ELB improved by 0.159238
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.768
ELB improved by 0.165788
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.599
ELB improved by 0.168963
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.428
ELB improved by 0.17109
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.254
ELB improved by 0.17355
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.079
ELB improved by 0.175432
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.905
ELB improved by 0.174043
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.737
ELB improved by 0.167544
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.58
ELB improved by 0.156955
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.435
ELB improved by 0.144983
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.302
ELB improved by 0.133811
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.177
ELB improved by 0.124424
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.06
ELB improved by 0.117051
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.948
ELB improved by 0.111679
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.84
ELB improved by 0.108363
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.733
ELB improved by 0.107432
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.623
ELB improved by 0.109611
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.507
ELB improved by 0.115846
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.381
ELB improved by 0.126323
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.243
ELB improved by 0.138374
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.097
ELB improved by 0.145531
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.955
ELB improved by 0.142195
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.825
ELB improved by 0.129867
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.71
ELB improved by 0.114626
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.61
ELB improved by 0.100584
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.521
ELB improved by 0.0883821
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.444
ELB improved by 0.0771359
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.378
ELB improved by 0.0662488
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.322
ELB improved by 0.0559794
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.275
ELB improved by 0.0470117
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.235
ELB improved by 0.0398561
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.2
ELB improved by 0.0346485
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.169
ELB improved by 0.0312926
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.14
ELB improved by 0.0296773
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.11
ELB improved by 0.0298381
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.078
ELB improved by 0.0320363
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.041
ELB improved by 0.0367137
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.997
ELB improved by 0.0441466
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.943
ELB improved by 0.0535571
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.881
ELB improved by 0.0620449
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.816
ELB improved by 0.0652324
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.755
ELB improved by 0.0607744
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.704
ELB improved by 0.0507146
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.665
ELB improved by 0.0391281
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.636
ELB improved by 0.0289412
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.615
ELB improved by 0.0212689
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.599
ELB improved by 0.0160768
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.586
ELB improved by 0.0128585
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.575
ELB improved by 0.0110663
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.565
ELB improved by 0.010311
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.554
ELB improved by 0.0104073
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.543
ELB improved by 0.0113658
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.53
ELB improved by 0.0133954
iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.513
ELB improved by 0.0169272
iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.49
ELB improved by 0.0226119
iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.459
ELB improved by 0.0311116
iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.417
ELB improved by 0.0423501
iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.362
ELB improved by 0.0542548
iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.3
ELB improved by 0.0628433
iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.234
ELB improved by 0.0657412
iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.169
ELB improved by 0.0646829
iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.107
ELB improved by 0.0622052
iteration 144
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.048
ELB improved by 0.0589687
iteration 145
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.993
ELB improved by 0.0553325
iteration 146
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.94
ELB improved by 0.0525556
iteration 147
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.888
ELB improved by 0.0520033
iteration 148
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.834
ELB improved by 0.0542628
iteration 149
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.775
ELB improved by 0.0589417
iteration 150
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.71
ELB improved by 0.0646025
iteration 151
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.641
ELB improved by 0.0687899
iteration 152
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.573
ELB improved by 0.0689294
iteration 153
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.508
ELB improved by 0.0641046
iteration 154
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.453
ELB improved by 0.0558527
iteration 155
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.406
ELB improved by 0.0468753
iteration 156
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.366
ELB improved by 0.039349
iteration 157
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.332
ELB improved by 0.0344213
iteration 158
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.299
ELB improved by 0.0326189
iteration 159
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.265
ELB improved by 0.034439
iteration 160
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.224
ELB improved by 0.0407756
iteration 161
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.171
ELB improved by 0.0528503
iteration 162
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.101
ELB improved by 0.070691
iteration 163
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.011
ELB improved by 0.0892155
iteration 164
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.915
ELB improved by 0.0966359
iteration 165
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.829
ELB improved by 0.0854651
iteration 166
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.766
ELB improved by 0.0632904
iteration 167
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.724
ELB improved by 0.0420572
iteration 168
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.697
ELB improved by 0.0267322
iteration 169
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.68
ELB improved by 0.0169585
iteration 170
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.669
ELB improved by 0.0110262
iteration 171
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.662
ELB improved by 0.00746584
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-905.21
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-573.753
ELB improved by 331.457
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-515.735
ELB improved by 58.0175
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.845
ELB improved by 28.8897
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-476.314
ELB improved by 10.5314
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.807
ELB improved by 5.50639
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.363
ELB improved by 4.44474
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.237
ELB improved by 4.12534
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.124
ELB improved by 4.11323
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.93
ELB improved by 4.19413
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.731
ELB improved by 4.19879
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.751
ELB improved by 3.98015
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.259
ELB improved by 3.49245
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.411
ELB improved by 2.84788
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.241
ELB improved by 2.16981
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.692
ELB improved by 1.54869
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.628
ELB improved by 1.06391
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.899
ELB improved by 0.729754
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.384
ELB improved by 0.514965
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.004
ELB improved by 0.379182
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.713
ELB improved by 0.291223
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.482
ELB improved by 0.231574
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.293
ELB improved by 0.18906
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.135
ELB improved by 0.157411
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.002
ELB improved by 0.133026
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.888
ELB improved by 0.113744
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.79
ELB improved by 0.0981913
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.705
ELB improved by 0.085451
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.63
ELB improved by 0.0748815
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.564
ELB improved by 0.0660192
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.505
ELB improved by 0.0585199
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.453
ELB improved by 0.0521226
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.407
ELB improved by 0.0466261
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.365
ELB improved by 0.0418732
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.327
ELB improved by 0.0377394
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.293
ELB improved by 0.0341251
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.262
ELB improved by 0.0309498
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.234
ELB improved by 0.0281479
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.208
ELB improved by 0.0256656
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.185
ELB improved by 0.0234582
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.163
ELB improved by 0.0214886
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.143
ELB improved by 0.0197256
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.125
ELB improved by 0.018143
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.109
ELB improved by 0.0167184
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.093
ELB improved by 0.0154328
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.079
ELB improved by 0.0142699
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.066
ELB improved by 0.0132157
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.053
ELB improved by 0.012258
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.042
ELB improved by 0.0113864
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.031
ELB improved by 0.0105915
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.022
ELB improved by 0.00986554
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-860.907
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-598.703
ELB improved by 262.205
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-536.741
ELB improved by 61.9621
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-484.088
ELB improved by 52.6529
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.686
ELB improved by 32.4015
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.204
ELB improved by 13.4825
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.157
ELB improved by 6.04711
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.468
ELB improved by 3.68845
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.722
ELB improved by 2.74655
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.41
ELB improved by 2.31184
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.333
ELB improved by 2.07718
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.41
ELB improved by 1.92258
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.607
ELB improved by 1.80299
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.902
ELB improved by 1.70506
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.277
ELB improved by 1.62468
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.722
ELB improved by 1.55583
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.234
ELB improved by 1.48726
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.829
ELB improved by 1.40511
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.531
ELB improved by 1.29822
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.371
ELB improved by 1.16025
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.379
ELB improved by 0.991885
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.568
ELB improved by 0.810679
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.92
ELB improved by 0.647876
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.395
ELB improved by 0.525443
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.949
ELB improved by 0.445549
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.551
ELB improved by 0.398431
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.179
ELB improved by 0.372266
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.821
ELB improved by 0.357717
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.472
ELB improved by 0.348622
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.131
ELB improved by 0.341357
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.797
ELB improved by 0.334087
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.471
ELB improved by 0.326186
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.153
ELB improved by 0.317804
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.843
ELB improved by 0.30953
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.541
ELB improved by 0.302103
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.245
ELB improved by 0.296207
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.953
ELB improved by 0.292338
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.662
ELB improved by 0.290725
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.371
ELB improved by 0.291293
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.077
ELB improved by 0.293629
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.78
ELB improved by 0.296977
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.48
ELB improved by 0.300274
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.177
ELB improved by 0.302281
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.876
ELB improved by 0.301804
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.578
ELB improved by 0.297958
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.287
ELB improved by 0.290362
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.008
ELB improved by 0.27919
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.743
ELB improved by 0.265089
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.494
ELB improved by 0.249026
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.262
ELB improved by 0.232146
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.046
ELB improved by 0.215657
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.846
ELB improved by 0.200704
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.657
ELB improved by 0.188154
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.479
ELB improved by 0.178257
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.309
ELB improved by 0.170292
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.146
ELB improved by 0.162619
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.993
ELB improved by 0.153559
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.85
ELB improved by 0.142525
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.72
ELB improved by 0.12999
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.604
ELB improved by 0.116316
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.502
ELB improved by 0.101406
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.417
ELB improved by 0.0857323
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.346
ELB improved by 0.0708397
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.287
ELB improved by 0.0583434
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.239
ELB improved by 0.0489454
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.196
ELB improved by 0.0424992
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.157
ELB improved by 0.0385462
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.121
ELB improved by 0.0366783
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.084
ELB improved by 0.0366429
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.046
ELB improved by 0.0383004
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.004
ELB improved by 0.041494
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.959
ELB improved by 0.0458283
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.908
ELB improved by 0.0503962
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.854
ELB improved by 0.0536617
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.801
ELB improved by 0.0538757
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.751
ELB improved by 0.050092
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.708
ELB improved by 0.0429925
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.673
ELB improved by 0.0345296
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.646
ELB improved by 0.0266605
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.626
ELB improved by 0.0204301
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.61
ELB improved by 0.0159606
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.597
ELB improved by 0.0129014
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.586
ELB improved by 0.0108145
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.577
ELB improved by 0.00934651
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-874.331
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-600.621
ELB improved by 273.711
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-542.974
ELB improved by 57.6473
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-501.772
ELB improved by 41.2021
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-481.455
ELB improved by 20.3163
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.926
ELB improved by 9.52966
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.636
ELB improved by 6.2899
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.876
ELB improved by 5.7593
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.211
ELB improved by 5.66518
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.13
ELB improved by 5.08107
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.155
ELB improved by 3.97541
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.327
ELB improved by 2.82784
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.386
ELB improved by 1.94097
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.041
ELB improved by 1.34488
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.077
ELB improved by 0.964339
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.364
ELB improved by 0.713006
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.832
ELB improved by 0.531833
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.435
ELB improved by 0.396881
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.134
ELB improved by 0.300471
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.9
ELB improved by 0.234248
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.712
ELB improved by 0.188629
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.555
ELB improved by 0.156105
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.424
ELB improved by 0.13188
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.31
ELB improved by 0.113114
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.212
ELB improved by 0.0981295
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.126
ELB improved by 0.0858971
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.051
ELB improved by 0.0757466
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.983
ELB improved by 0.0672176
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.924
ELB improved by 0.0599781
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.87
ELB improved by 0.0537806
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.821
ELB improved by 0.0484354
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.777
ELB improved by 0.043795
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.738
ELB improved by 0.0397423
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.702
ELB improved by 0.0361838
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.669
ELB improved by 0.0330439
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.638
ELB improved by 0.0302609
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.61
ELB improved by 0.0277841
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.585
ELB improved by 0.0255714
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.561
ELB improved by 0.0235876
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.54
ELB improved by 0.0218034
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.519
ELB improved by 0.0201939
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.501
ELB improved by 0.0187379
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.483
ELB improved by 0.0174174
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.467
ELB improved by 0.0162168
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.452
ELB improved by 0.0151228
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.438
ELB improved by 0.0141238
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.424
ELB improved by 0.0132098
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.412
ELB improved by 0.012372
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.401
ELB improved by 0.0116026
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.39
ELB improved by 0.010895
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.379
ELB improved by 0.0102431
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.37
ELB improved by 0.00964161
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.859 0.201 3.055
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.049 | 0.004 | 0.053 | |
| getPIPs | 0.043 | 0.005 | 0.048 | |
| graper | 0.072 | 0.004 | 0.076 | |
| makeExampleData | 0.005 | 0.004 | 0.008 | |
| makeExampleDataWithUnequalGroups | 0.01 | 0.00 | 0.01 | |
| plotELBO | 0.266 | 0.000 | 0.267 | |
| plotGroupPenalties | 1.042 | 0.008 | 1.052 | |
| plotPosterior | 0.878 | 0.032 | 0.912 | |
| predict.graper | 0.980 | 0.020 | 1.001 | |
| print.graper | 0.041 | 0.008 | 0.049 | |