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This page was generated on 2023-06-01 18:17:19 -0400 (Thu, 01 Jun 2023).

HostnameOSArch (*)R versionInstalled pkgs
xps15Linux (Ubuntu 23.04)x86_644.3.0 Patched (2023-05-23 r84466) -- "Already Tomorrow" 544
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INSTALL results for microRNA on xps15


To the developers/maintainers of the microRNA package:
Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

Package 55/91HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
microRNA 1.59.0  (landing page)
"James F. Reid"
Snapshot Date: 2023-06-01 15:10:15 -0400 (Thu, 01 Jun 2023)
git_url: https://git.bioconductor.org/packages/microRNA
git_branch: devel
git_last_commit: 1448fa8
git_last_commit_date: 2023-04-25 09:47:35 -0400 (Tue, 25 Apr 2023)
xps15Linux (Ubuntu 23.04) / x86_64  OK    OK    OK  

Summary

Package: microRNA
Version: 1.59.0
Command: /home/hpages/bbs-3.18-bioc/R/bin/R CMD INSTALL microRNA
StartedAt: 2023-06-01 12:22:42 -0700 (Thu, 01 Jun 2023)
EndedAt: 2023-06-01 12:22:58 -0700 (Thu, 01 Jun 2023)
EllapsedTime: 16.0 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
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###   /home/hpages/bbs-3.18-bioc/R/bin/R CMD INSTALL microRNA
###
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* installing to library ‘/home/hpages/bbs-3.18-bioc-testing/Rlibs’
* installing *source* package ‘microRNA’ ...
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 12.2.0-17ubuntu1) 12.2.0’
g++ -std=gnu++17 -I"/home/hpages/bbs-3.18-bioc/R/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2  -Wall -c longest_common_substring.cpp -o longest_common_substring.o
longest_common_substring.cpp: In function ‘SEXPREC* longest_common_substring(SEXP)’:
longest_common_substring.cpp:55:15: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type’ {aka ‘int’} [-Wsign-compare]
   55 |         if (i == len[index] - 1) { // ignore null termination character
      |             ~~^~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -shared -L/usr/local/lib -o microRNA.so longest_common_substring.o
installing to /home/hpages/bbs-3.18-bioc-testing/Rlibs/00LOCK-microRNA/00new/microRNA/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (microRNA)