| Back to First build/check report with an "external build node" |
This page was generated on 2023-06-01 18:17:19 -0400 (Thu, 01 Jun 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| xps15 | Linux (Ubuntu 23.04) | x86_64 | 4.3.0 Patched (2023-05-23 r84466) -- "Already Tomorrow" | 544 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the microRNA package: Use the following Renviron settings to reproduce errors and warnings. Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details. |
| Package 55/91 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||
| microRNA 1.59.0 (landing page) "James F. Reid"
| xps15 | Linux (Ubuntu 23.04) / x86_64 | OK | OK | OK | ||||||||
| Package: microRNA |
| Version: 1.59.0 |
| Command: /home/hpages/bbs-3.18-bioc/R/bin/R CMD INSTALL microRNA |
| StartedAt: 2023-06-01 12:22:42 -0700 (Thu, 01 Jun 2023) |
| EndedAt: 2023-06-01 12:22:58 -0700 (Thu, 01 Jun 2023) |
| EllapsedTime: 16.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### /home/hpages/bbs-3.18-bioc/R/bin/R CMD INSTALL microRNA
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* installing to library ‘/home/hpages/bbs-3.18-bioc-testing/Rlibs’
* installing *source* package ‘microRNA’ ...
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 12.2.0-17ubuntu1) 12.2.0’
g++ -std=gnu++17 -I"/home/hpages/bbs-3.18-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c longest_common_substring.cpp -o longest_common_substring.o
longest_common_substring.cpp: In function ‘SEXPREC* longest_common_substring(SEXP)’:
longest_common_substring.cpp:55:15: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type’ {aka ‘int’} [-Wsign-compare]
55 | if (i == len[index] - 1) { // ignore null termination character
| ~~^~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -shared -L/usr/local/lib -o microRNA.so longest_common_substring.o
installing to /home/hpages/bbs-3.18-bioc-testing/Rlibs/00LOCK-microRNA/00new/microRNA/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (microRNA)