Back to First build/check report with an "external build node" |
This page was generated on 2023-06-01 18:17:19 -0400 (Thu, 01 Jun 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
xps15 | Linux (Ubuntu 23.04) | x86_64 | 4.3.0 Patched (2023-05-23 r84466) -- "Already Tomorrow" | 544 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the microRNA package: Use the following Renviron settings to reproduce errors and warnings. Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details. |
Package 55/91 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||
microRNA 1.59.0 (landing page) "James F. Reid"
| xps15 | Linux (Ubuntu 23.04) / x86_64 | OK | OK | OK | ||||||||
Package: microRNA |
Version: 1.59.0 |
Command: /home/hpages/bbs-3.18-bioc/R/bin/R CMD INSTALL microRNA |
StartedAt: 2023-06-01 12:22:42 -0700 (Thu, 01 Jun 2023) |
EndedAt: 2023-06-01 12:22:58 -0700 (Thu, 01 Jun 2023) |
EllapsedTime: 16.0 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/hpages/bbs-3.18-bioc/R/bin/R CMD INSTALL microRNA ### ############################################################################## ############################################################################## * installing to library ‘/home/hpages/bbs-3.18-bioc-testing/Rlibs’ * installing *source* package ‘microRNA’ ... ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 12.2.0-17ubuntu1) 12.2.0’ g++ -std=gnu++17 -I"/home/hpages/bbs-3.18-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c longest_common_substring.cpp -o longest_common_substring.o longest_common_substring.cpp: In function ‘SEXPREC* longest_common_substring(SEXP)’: longest_common_substring.cpp:55:15: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type’ {aka ‘int’} [-Wsign-compare] 55 | if (i == len[index] - 1) { // ignore null termination character | ~~^~~~~~~~~~~~~~~~~ g++ -std=gnu++17 -shared -L/usr/local/lib -o microRNA.so longest_common_substring.o installing to /home/hpages/bbs-3.18-bioc-testing/Rlibs/00LOCK-microRNA/00new/microRNA/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (microRNA)