Back to First build/check report with an "external build node" |
This page was generated on 2023-06-01 18:17:19 -0400 (Thu, 01 Jun 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
xps15 | Linux (Ubuntu 23.04) | x86_64 | 4.3.0 Patched (2023-05-23 r84466) -- "Already Tomorrow" | 544 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the Biobase package: Use the following Renviron settings to reproduce errors and warnings. Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details. |
Package 13/91 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||
Biobase 2.61.0 (landing page) Bioconductor Package Maintainer
| xps15 | Linux (Ubuntu 23.04) / x86_64 | OK | OK | WARNINGS | ||||||||
Package: Biobase |
Version: 2.61.0 |
Command: /home/hpages/bbs-3.18-bioc/R/bin/R CMD INSTALL Biobase |
StartedAt: 2023-06-01 12:19:09 -0700 (Thu, 01 Jun 2023) |
EndedAt: 2023-06-01 12:19:20 -0700 (Thu, 01 Jun 2023) |
EllapsedTime: 11.0 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/hpages/bbs-3.18-bioc/R/bin/R CMD INSTALL Biobase ### ############################################################################## ############################################################################## * installing to library ‘/home/hpages/bbs-3.18-bioc-testing/Rlibs’ * installing *source* package ‘Biobase’ ... ** using staged installation ** libs using C compiler: ‘gcc (Ubuntu 12.2.0-17ubuntu1) 12.2.0’ gcc -I"/home/hpages/bbs-3.18-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c Rinit.c -o Rinit.o gcc -I"/home/hpages/bbs-3.18-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c anyMissing.c -o anyMissing.o gcc -I"/home/hpages/bbs-3.18-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c envir.c -o envir.o gcc -I"/home/hpages/bbs-3.18-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c matchpt.c -o matchpt.o gcc -I"/home/hpages/bbs-3.18-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c rowMedians.c -o rowMedians.o gcc -I"/home/hpages/bbs-3.18-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c sublist_extract.c -o sublist_extract.o gcc -shared -L/usr/local/lib -o Biobase.so Rinit.o anyMissing.o envir.o matchpt.o rowMedians.o sublist_extract.o installing to /home/hpages/bbs-3.18-bioc-testing/Rlibs/00LOCK-Biobase/00new/Biobase/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Biobase)