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This page was generated on 2024-04-18 11:32:10 -0400 (Thu, 18 Apr 2024).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson1macOS 13.6.1 Venturaarm644.3.3 (2024-02-29) -- "Angel Food Cake" 4388
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Package 763/2266HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
gaggle 1.70.0  (landing page)
Christopher Bare
Snapshot Date: 2024-04-16 09:00:03 -0400 (Tue, 16 Apr 2024)
git_url: https://git.bioconductor.org/packages/gaggle
git_branch: RELEASE_3_18
git_last_commit: ea1b1b6
git_last_commit_date: 2023-10-24 09:36:54 -0400 (Tue, 24 Oct 2023)
kjohnson1macOS 13.6.1 Ventura / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

INSTALL results for gaggle on kjohnson1


To the developers/maintainers of the gaggle package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: gaggle
Version: 1.70.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL gaggle
StartedAt: 2024-04-16 10:08:05 -0400 (Tue, 16 Apr 2024)
EndedAt: 2024-04-16 10:08:10 -0400 (Tue, 16 Apr 2024)
EllapsedTime: 4.9 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL gaggle
###
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* installing to library ‘/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library’
* installing *source* package ‘gaggle’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location

onLoad -- libname: /Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/00LOCK-gaggle/00new pkgname: gaggle 
path to jar: /Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/00LOCK-gaggle/00new/gaggle/jars/gaggleRShell.jar 
      script:  gaggle.R $Revision: 4499 $   $Date: 2010-08-10 17:15:03 -0700 (Tue, 10 Aug 2010) $ 
  os version:  Mac OS X 
 jvm version:  18.0.1.1 

   You are using the wrong version of Java.
   Please see http://gaggle.systemsbiology.org/docs/html/java

Warning: Package 'gaggle' is deprecated and will be removed from Bioconductor
  version 3.19
** testing if installed package can be loaded from final location

onLoad -- libname: /Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library pkgname: gaggle 
path to jar: /Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/gaggle/jars/gaggleRShell.jar 
      script:  gaggle.R $Revision: 4499 $   $Date: 2010-08-10 17:15:03 -0700 (Tue, 10 Aug 2010) $ 
  os version:  Mac OS X 
 jvm version:  18.0.1.1 

   You are using the wrong version of Java.
   Please see http://gaggle.systemsbiology.org/docs/html/java

Warning: Package 'gaggle' is deprecated and will be removed from Bioconductor
  version 3.19
** testing if installed package keeps a record of temporary installation path
* DONE (gaggle)