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This page was generated on 2024-04-15 11:32:22 -0400 (Mon, 15 Apr 2024).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson1macOS 13.6.1 Venturaarm644.3.3 (2024-02-29) -- "Angel Food Cake" 4388
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 2105/2266HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TAPseq 1.14.1  (landing page)
Andreas R. Gschwind
Snapshot Date: 2024-04-13 09:00:03 -0400 (Sat, 13 Apr 2024)
git_url: https://git.bioconductor.org/packages/TAPseq
git_branch: RELEASE_3_18
git_last_commit: bc862df
git_last_commit_date: 2023-11-06 23:39:08 -0400 (Mon, 06 Nov 2023)
kjohnson1macOS 13.6.1 Ventura / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

BUILD BIN results for TAPseq on kjohnson1


To the developers/maintainers of the TAPseq package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: TAPseq
Version: 1.14.1
Command: rm -rf TAPseq.buildbin-libdir && mkdir TAPseq.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh TAPseq_1.14.1.tar.gz /Library/Frameworks/R.framework/Resources/bin/R TAPseq.buildbin-libdir
StartedAt: 2024-04-15 10:44:17 -0400 (Mon, 15 Apr 2024)
EndedAt: 2024-04-15 10:45:22 -0400 (Mon, 15 Apr 2024)
EllapsedTime: 65.1 seconds
RetCode: 0
Status:   OK  
PackageFile: TAPseq_1.14.1.tgz
PackageFileSize: 2.953 MiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf TAPseq.buildbin-libdir && mkdir TAPseq.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh TAPseq_1.14.1.tar.gz /Library/Frameworks/R.framework/Resources/bin/R TAPseq.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=TAPseq.buildbin-libdir TAPseq_1.14.1.tar.gz'
>>>>>>> 

* installing *source* package ‘TAPseq’ ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Following software required by TAPseq is not installed or not in PATH:

	primer3_core
	makeblastdb
	blastn

Please install these tools before trying to use this package!
** testing if installed package can be loaded from final location
Warning: Following software required by TAPseq is not installed or not in PATH:

	primer3_core
	makeblastdb
	blastn

Please install these tools before trying to use this package!
** testing if installed package keeps a record of temporary installation path
* DONE (TAPseq)