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This page was generated on 2024-04-18 11:32:13 -0400 (Thu, 18 Apr 2024).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson1macOS 13.6.1 Venturaarm644.3.3 (2024-02-29) -- "Angel Food Cake" 4388
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1252/2266HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MicrobiotaProcess 1.14.1  (landing page)
Shuangbin Xu
Snapshot Date: 2024-04-16 09:00:03 -0400 (Tue, 16 Apr 2024)
git_url: https://git.bioconductor.org/packages/MicrobiotaProcess
git_branch: RELEASE_3_18
git_last_commit: 9fc267f
git_last_commit_date: 2024-03-26 02:38:38 -0400 (Tue, 26 Mar 2024)
kjohnson1macOS 13.6.1 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published

BUILD BIN results for MicrobiotaProcess on kjohnson1


To the developers/maintainers of the MicrobiotaProcess package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: MicrobiotaProcess
Version: 1.14.1
Command: rm -rf MicrobiotaProcess.buildbin-libdir && mkdir MicrobiotaProcess.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh MicrobiotaProcess_1.14.1.tar.gz /Library/Frameworks/R.framework/Resources/bin/R MicrobiotaProcess.buildbin-libdir
StartedAt: 2024-04-18 10:07:03 -0400 (Thu, 18 Apr 2024)
EndedAt: 2024-04-18 10:08:31 -0400 (Thu, 18 Apr 2024)
EllapsedTime: 87.4 seconds
RetCode: 0
Status:   OK  
PackageFile: MicrobiotaProcess_1.14.1.tgz
PackageFileSize: 5.716 MiB

Command output

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### Running command:
###
###   rm -rf MicrobiotaProcess.buildbin-libdir && mkdir MicrobiotaProcess.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh MicrobiotaProcess_1.14.1.tar.gz /Library/Frameworks/R.framework/Resources/bin/R MicrobiotaProcess.buildbin-libdir
###
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>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=MicrobiotaProcess.buildbin-libdir MicrobiotaProcess_1.14.1.tar.gz'
>>>>>>> 

* installing *source* package ‘MicrobiotaProcess’ ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
in method for ‘taxonomy<-’ with signature ‘x="MPSE",value="taxonomyTable"’: no definition for class “taxonomyTable”
Creating a generic function for ‘rownames<-’ from package ‘base’ in package ‘MicrobiotaProcess’
in method for ‘get_alltaxadf’ with signature ‘"phyloseq"’: no definition for class “phyloseq”
in method for ‘get_taxadf’ with signature ‘"phyloseq"’: no definition for class “phyloseq”
in method for ‘get_alphaindex’ with signature ‘"phyloseq"’: no definition for class “phyloseq”
in method for ‘get_NRI_NTI’ with signature ‘"phyloseq"’: no definition for class “phyloseq”
in method for ‘get_rarecurve’ with signature ‘"phyloseq"’: no definition for class “phyloseq”
in method for ‘get_upset’ with signature ‘"phyloseq"’: no definition for class “phyloseq”
in method for ‘get_vennlist’ with signature ‘"phyloseq"’: no definition for class “phyloseq”
in method for ‘drop_taxa’ with signature ‘"phyloseq"’: no definition for class “phyloseq”
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (MicrobiotaProcess)