Back to Mac ARM64 build report for BioC 3.18
ABCDEFGHIJK[L]MNOPQRSTUVWXYZ

This page was generated on 2024-04-18 11:32:12 -0400 (Thu, 18 Apr 2024).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson1macOS 13.6.1 Venturaarm644.3.3 (2024-02-29) -- "Angel Food Cake" 4388
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1112/2266HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
LowMACA 1.32.0  (landing page)
Giorgio Melloni , Stefano de Pretis
Snapshot Date: 2024-04-16 09:00:03 -0400 (Tue, 16 Apr 2024)
git_url: https://git.bioconductor.org/packages/LowMACA
git_branch: RELEASE_3_18
git_last_commit: d380379
git_last_commit_date: 2023-10-24 10:42:28 -0400 (Tue, 24 Oct 2023)
kjohnson1macOS 13.6.1 Ventura / arm64  ERROR    ERROR  skippedskipped

BUILD results for LowMACA on kjohnson1


To the developers/maintainers of the LowMACA package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: LowMACA
Version: 1.32.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data LowMACA
StartedAt: 2024-04-16 20:52:13 -0400 (Tue, 16 Apr 2024)
EndedAt: 2024-04-16 20:53:01 -0400 (Tue, 16 Apr 2024)
EllapsedTime: 48.8 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data LowMACA
###
##############################################################################
##############################################################################


* checking for file ‘LowMACA/DESCRIPTION’ ... OK
* preparing ‘LowMACA’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘LowMACA’ ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Checking if clustalo is in the PATH...
Checking clustalo Version...
sh: /usr/local/bin/clustalo: Bad CPU type in executable
Warning in system(paste(ClustalCommand, "--version"), intern = TRUE) :
  running command '/usr/local/bin/clustalo --version' had status 126
Error: package or namespace load failed for ‘LowMACA’:
 .onLoad failed in loadNamespace() for 'LowMACA', details:
  call: if (!grepl("^1.2", ClustalVersion)) warning("Clustal Omega version could be not compatible. LowMACA was tested on 1.2.x")
  error: argument is of length zero
Error: loading failed
Execution halted
ERROR: loading failed
* removing ‘/private/tmp/Rtmpde6iOH/Rinst167a36267f6b7/LowMACA’
      -----------------------------------
ERROR: package installation failed