| Back to Build/check report for BioC 3.18: simplified long |
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This page was generated on 2023-04-20 12:50:30 -0400 (Thu, 20 Apr 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) | x86_64 | R Under development (unstable) (2023-04-19 r84288) -- "Unsuffered Consequences" | 3941 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the genotypeeval package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/genotypeeval.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details. |
| Package 814/2223 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Jennifer Tom
| nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) / x86_64 | OK | OK | ERROR | |||||||||
| Package: genotypeeval |
| Version: 1.31.1 |
| Command: /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD check --install=check:genotypeeval.install-out.txt --library=/home/biocbuild/bbs-3.18-bioc/R/site-library --timings genotypeeval_1.31.1.tar.gz |
| StartedAt: 2023-04-20 07:32:45 -0400 (Thu, 20 Apr 2023) |
| EndedAt: 2023-04-20 07:32:51 -0400 (Thu, 20 Apr 2023) |
| EllapsedTime: 6.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| CheckDir: genotypeeval.Rcheck |
| Warnings: NA |
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### Running command:
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### /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD check --install=check:genotypeeval.install-out.txt --library=/home/biocbuild/bbs-3.18-bioc/R/site-library --timings genotypeeval_1.31.1.tar.gz
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* using log directory ‘/home/biocbuild/bbs-3.18-bioc/meat/genotypeeval.Rcheck’
* using R Under development (unstable) (2023-04-19 r84288)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0
GNU Fortran (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0
* running under: Ubuntu 22.04.2 LTS
* using session charset: UTF-8
* checking for file ‘genotypeeval/DESCRIPTION’ ... OK
* this is package ‘genotypeeval’ version ‘1.31.1’
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: ‘SNPlocs.Hsapiens.dbSNP141.GRCh38’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
See
‘/home/biocbuild/bbs-3.18-bioc/meat/genotypeeval.Rcheck/00check.log’
for details.