| Back to Multiple platform build/check report for BioC 3.18: simplified long | 
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This page was generated on 2023-11-02 11:40:28 -0400 (Thu, 02 Nov 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs | 
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 22.04.2 LTS) | x86_64 | 4.3.1 (2023-06-16) -- "Beagle Scouts" | 4729 | 
| palomino4 | Windows Server 2022 Datacenter | x64 | 4.3.1 (2023-06-16 ucrt) -- "Beagle Scouts" | 4463 | 
| lconway | macOS 12.6.5 Monterey | x86_64 | 4.3.1 Patched (2023-06-17 r84564) -- "Beagle Scouts" | 4478 | 
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.3.1 (2023-06-16) -- "Beagle Scouts" | 4464 | 
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 210/2266 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| Yang Du 
 | nebbiolo2 | Linux (Ubuntu 22.04.2 LTS) / x86_64 | ERROR | ERROR | skipped | |||||||||
| palomino4 | Windows Server 2022 Datacenter / x64 | ERROR | ERROR | skipped | skipped | |||||||||
| lconway | macOS 12.6.5 Monterey / x86_64 | ERROR | ERROR | skipped | skipped | |||||||||
| kjohnson1 | macOS 13.6.1 Ventura / arm64 | see weekly results here | ||||||||||||
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | ERROR | ERROR | skipped | ||||||||||
| To the developers/maintainers of the biomvRCNS package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/biomvRCNS.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. | 
| Package: biomvRCNS | 
| Version: 1.42.0 | 
| Command: /home/biocbuild/R/R-4.3.1/bin/R CMD build --keep-empty-dirs --no-resave-data biomvRCNS | 
| StartedAt: 2023-11-01 22:44:59 -0000 (Wed, 01 Nov 2023) | 
| EndedAt: 2023-11-01 22:45:00 -0000 (Wed, 01 Nov 2023) | 
| EllapsedTime: 1.0 seconds | 
| RetCode: 1 | 
| Status: ERROR | 
| PackageFile: None | 
| PackageFileSize: NA | 
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### Running command:
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###   /home/biocbuild/R/R-4.3.1/bin/R CMD build --keep-empty-dirs --no-resave-data biomvRCNS
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* checking for file ‘biomvRCNS/DESCRIPTION’ ... OK
* preparing ‘biomvRCNS’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘biomvRCNS’ ...
** using staged installation
** libs
using C compiler: ‘gcc (GCC) 10.3.1’
gcc -I"/home/biocbuild/R/R-4.3.1/include" -DNDEBUG   -I/usr/local/include    -fPIC  -g -O2  -Wall -c biomvRCNS.c -o biomvRCNS.o
biomvRCNS.c: In function ‘forward’:
biomvRCNS.c:153:22: error: ‘DOUBLE_XMIN’ undeclared (first use in this function); did you mean ‘DBL_MIN’?
  153 |    m_e(F, t, j, T)+= DOUBLE_XMIN;
      |                      ^~~~~~~~~~~
      |                      DBL_MIN
biomvRCNS.c:153:22: note: each undeclared identifier is reported only once for each function it appears in
biomvRCNS.c: In function ‘viterbi’:
biomvRCNS.c:294:29: error: ‘DOUBLE_XMAX’ undeclared (first use in this function); did you mean ‘DBL_MAX’?
  294 |  double obs, prod, maxprod=-DOUBLE_XMAX;
      |                             ^~~~~~~~~~~
      |                             DBL_MAX
biomvRCNS.c: In function ‘logviterbi’:
biomvRCNS.c:401:29: error: ‘DOUBLE_XMAX’ undeclared (first use in this function); did you mean ‘DBL_MAX’?
  401 |  double obs, prod, maxprod=-DOUBLE_XMAX;
      |                             ^~~~~~~~~~~
      |                             DBL_MAX
make: *** [/home/biocbuild/R/R-4.3.1/etc/Makeconf:191: biomvRCNS.o] Error 1
ERROR: compilation failed for package ‘biomvRCNS’
* removing ‘/home/biocbuild/tmp/RtmpIVPFbh/Rinst295b635b60f828/biomvRCNS’
      -----------------------------------
ERROR: package installation failed