Multiple platform build/check report for BioC 3.18 - BUILD results for alpine on palomino4

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This page was generated on 2023-04-22 11:18:58 -0400 (Sat, 22 Apr 2023).

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 22.04.2 LTS)	x86_64	4.3.0 RC (2023-04-18 r84287) -- "Already Tomorrow"	4318
palomino4	Windows Server 2022 Datacenter	x64	4.3.0 RC (2023-04-18 r84287 ucrt) -- "Already Tomorrow"	4236
lconway	macOS 12.5.1 Monterey	x86_64	4.3.0 RC (2023-04-13 r84266) -- "Already Tomorrow"	4278
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for alpine on palomino4

To the developers/maintainers of the alpine package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/alpine.git to reflect on this report. See Troubleshooting Build Report for more information.

- Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

alpine 1.25.0 (landing page)
Michael Love

Snapshot Date: 2023-04-21 14:00:07 -0400 (Fri, 21 Apr 2023)

git_url: https://git.bioconductor.org/packages/alpine

git_branch: devel

git_last_commit: 609ae1e

git_last_commit_date: 2022-11-01 11:14:18 -0400 (Tue, 01 Nov 2022)

nebbiolo2

Linux (Ubuntu 22.04.2 LTS) / x86_64

ERROR

skipped

palomino4

Windows Server 2022 Datacenter / x64

ERROR

skipped

lconway

macOS 12.5.1 Monterey / x86_64

ERROR

skipped

Summary

Package: alpine

Version: 1.25.0

Command: chmod a+r alpine -R && F:\biocbuild\bbs-3.18-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data alpine

StartedAt: 2023-04-21 17:35:53 -0400 (Fri, 21 Apr 2023)

EndedAt: 2023-04-21 17:35:55 -0400 (Fri, 21 Apr 2023)

EllapsedTime: 2.2 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r alpine -R && F:\biocbuild\bbs-3.18-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data alpine
###
##############################################################################
##############################################################################


* checking for file 'alpine/DESCRIPTION' ... OK
* preparing 'alpine':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
ERROR: dependency 'speedglm' is not available for package 'alpine'
* removing 'F:/biocbuild/bbs-3.18-bioc/tmpdir/RtmpOoJuw3/Rinstc386117574/alpine'
      -----------------------------------
ERROR: package installation failed