| Back to Multiple platform build/check report for BioC 3.17 |
|
This page was generated on 2023-04-12 10:55:25 -0400 (Wed, 12 Apr 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.1 LTS) | x86_64 | 4.3.0 alpha (2023-04-03 r84154) | 4547 |
| nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) | x86_64 | R Under development (unstable) (2023-02-14 r83833) -- "Unsuffered Consequences" | 4333 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details. |
| Package 867/2207 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.15.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 22.04.1 LTS) / x86_64 | OK | OK | OK | |||||||||
| nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) / x86_64 | OK | OK | OK | ||||||||||
| Package: graper |
| Version: 1.15.0 |
| Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/site-library --timings graper_1.15.0.tar.gz |
| StartedAt: 2023-04-11 20:43:01 -0400 (Tue, 11 Apr 2023) |
| EndedAt: 2023-04-11 20:44:23 -0400 (Tue, 11 Apr 2023) |
| EllapsedTime: 82.2 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/site-library --timings graper_1.15.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.17-bioc/meat/graper.Rcheck’
* using R version 4.3.0 alpha (2023-04-03 r84154)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0
GNU Fortran (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0
* running under: Ubuntu 22.04.2 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.15.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0’
* checking C++ specification ... NOTE
Specified C++11: please drop specification unless essential
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ...
‘example_linear.Rmd’ using ‘UTF-8’... OK
‘example_logistic.Rmd’ using ‘UTF-8’... OK
NONE
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.17-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################
* installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/site-library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0’
using C++11
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.17-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.17-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.17-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.17-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.17-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.17-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -c fit_graper.cpp -o fit_graper.o
In file included from /home/biocbuild/bbs-3.17-bioc/R/site-library/BH/include/boost/mpl/aux_/na_assert.hpp:23,
from /home/biocbuild/bbs-3.17-bioc/R/site-library/BH/include/boost/mpl/arg.hpp:25,
from /home/biocbuild/bbs-3.17-bioc/R/site-library/BH/include/boost/mpl/placeholders.hpp:24,
from /home/biocbuild/bbs-3.17-bioc/R/site-library/BH/include/boost/iterator/iterator_categories.hpp:16,
from /home/biocbuild/bbs-3.17-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:13,
from /home/biocbuild/bbs-3.17-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:27,
from /home/biocbuild/bbs-3.17-bioc/R/site-library/BH/include/boost/lexical_cast.hpp:30,
from /home/biocbuild/bbs-3.17-bioc/R/site-library/BH/include/boost/math/tools/convert_from_string.hpp:15,
from /home/biocbuild/bbs-3.17-bioc/R/site-library/BH/include/boost/math/constants/constants.hpp:14,
from /home/biocbuild/bbs-3.17-bioc/R/site-library/BH/include/boost/math/special_functions/digamma.hpp:20,
from graper_linear_dense_ff.h:2,
from fit_graper.cpp:4:
/home/biocbuild/bbs-3.17-bioc/R/site-library/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses]
194 | failed ************ (Pred::************
| ^~~~~~~~~~~~~~~~~~~
195 | assert_arg( void (*)(Pred), typename assert_arg_pred<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
196 | );
| ~
/home/biocbuild/bbs-3.17-bioc/R/site-library/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses
194 | failed ************ (Pred::************
| ^~~~~~~~~~~~~~~~~~~
| -
195 | assert_arg( void (*)(Pred), typename assert_arg_pred<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
196 | );
| ~
| -
/home/biocbuild/bbs-3.17-bioc/R/site-library/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses]
199 | failed ************ (boost::mpl::not_<Pred>::************
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
201 | );
| ~
/home/biocbuild/bbs-3.17-bioc/R/site-library/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses
199 | failed ************ (boost::mpl::not_<Pred>::************
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
| -
200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
201 | );
| ~
| -
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.17-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.17-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.17-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.17-bioc/R/site-library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.3.0 alpha (2023-04-03 r84154)
Copyright (C) 2023 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-894.438
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-581.467
ELB improved by 312.971
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-522.857
ELB improved by 58.6097
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-487.845
ELB improved by 35.012
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.393
ELB improved by 16.4524
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.021
ELB improved by 8.37155
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.72
ELB improved by 6.30119
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.575
ELB improved by 6.14461
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.087
ELB improved by 6.48798
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.495
ELB improved by 6.59233
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.527
ELB improved by 5.96751
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.746
ELB improved by 4.78096
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.186
ELB improved by 3.5606
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.586
ELB improved by 2.59949
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.716
ELB improved by 1.86986
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.414
ELB improved by 1.30284
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.504
ELB improved by 0.909294
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.842
ELB improved by 0.662436
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.333
ELB improved by 0.508488
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.926
ELB improved by 0.407634
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.588
ELB improved by 0.337577
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.302
ELB improved by 0.28656
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.053
ELB improved by 0.248141
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.835
ELB improved by 0.218512
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.64
ELB improved by 0.195252
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.463
ELB improved by 0.17673
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.301
ELB improved by 0.161801
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.152
ELB improved by 0.149638
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.012
ELB improved by 0.139628
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.881
ELB improved by 0.131313
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.756
ELB improved by 0.124345
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.638
ELB improved by 0.11846
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.524
ELB improved by 0.113455
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.415
ELB improved by 0.109175
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.31
ELB improved by 0.105502
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.207
ELB improved by 0.102346
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.108
ELB improved by 0.0996406
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.01
ELB improved by 0.0973344
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.915
ELB improved by 0.0953892
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.821
ELB improved by 0.0937754
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.729
ELB improved by 0.0924687
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.637
ELB improved by 0.0914482
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.547
ELB improved by 0.0906939
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.456
ELB improved by 0.0901853
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.366
ELB improved by 0.0899001
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.277
ELB improved by 0.0898136
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.187
ELB improved by 0.0898975
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.097
ELB improved by 0.0901206
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.006
ELB improved by 0.090448
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.915
ELB improved by 0.0908416
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.824
ELB improved by 0.0912609
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.732
ELB improved by 0.0916629
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.64
ELB improved by 0.0920039
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.548
ELB improved by 0.0922397
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.456
ELB improved by 0.0923275
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.364
ELB improved by 0.0922262
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.272
ELB improved by 0.0918984
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.18
ELB improved by 0.0913105
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.09
ELB improved by 0.090434
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.001
ELB improved by 0.089246
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.913
ELB improved by 0.0877297
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.827
ELB improved by 0.0858754
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.743
ELB improved by 0.0836814
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.662
ELB improved by 0.081155
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.584
ELB improved by 0.0783137
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.509
ELB improved by 0.0751854
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.437
ELB improved by 0.0718081
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.369
ELB improved by 0.0682285
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.304
ELB improved by 0.0644994
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.244
ELB improved by 0.0606768
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.187
ELB improved by 0.0568164
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.134
ELB improved by 0.0529708
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.085
ELB improved by 0.0491871
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.039
ELB improved by 0.0455059
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.997
ELB improved by 0.0419603
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.959
ELB improved by 0.0385759
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.923
ELB improved by 0.0353715
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.891
ELB improved by 0.0323592
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.861
ELB improved by 0.0295457
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.834
ELB improved by 0.0269328
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.81
ELB improved by 0.0245185
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.788
ELB improved by 0.0222978
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.767
ELB improved by 0.0202631
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.749
ELB improved by 0.0184052
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.732
ELB improved by 0.0167138
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.717
ELB improved by 0.015178
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.703
ELB improved by 0.0137864
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.691
ELB improved by 0.0125278
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.679
ELB improved by 0.0113912
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.669
ELB improved by 0.0103662
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.659
ELB improved by 0.00944256
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-861.544
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-596.277
ELB improved by 265.267
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-533.854
ELB improved by 62.4233
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-488.376
ELB improved by 45.4779
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.039
ELB improved by 22.3368
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.709
ELB improved by 9.33032
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.883
ELB improved by 5.82628
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.028
ELB improved by 4.85455
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.486
ELB improved by 4.5422
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.135
ELB improved by 4.35076
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.106
ELB improved by 4.02939
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.63
ELB improved by 3.47545
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.808
ELB improved by 2.82213
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.509
ELB improved by 2.29926
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.636
ELB improved by 1.87335
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.251
ELB improved by 1.3842
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.309
ELB improved by 0.942645
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.656
ELB improved by 0.652378
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.176
ELB improved by 0.480345
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.8
ELB improved by 0.375873
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.492
ELB improved by 0.308151
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.231
ELB improved by 0.261346
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.003
ELB improved by 0.227389
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.801
ELB improved by 0.201943
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.619
ELB improved by 0.182499
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.451
ELB improved by 0.1675
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.295
ELB improved by 0.155923
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.148
ELB improved by 0.147069
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.008
ELB improved by 0.14045
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.872
ELB improved by 0.135723
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.74
ELB improved by 0.132648
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.609
ELB improved by 0.131054
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.478
ELB improved by 0.130812
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.346
ELB improved by 0.131808
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.212
ELB improved by 0.133906
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.075
ELB improved by 0.136926
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.934
ELB improved by 0.140626
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.79
ELB improved by 0.144724
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.641
ELB improved by 0.148941
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.488
ELB improved by 0.153053
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.331
ELB improved by 0.156908
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.17
ELB improved by 0.160414
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.007
ELB improved by 0.1635
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.841
ELB improved by 0.166085
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.673
ELB improved by 0.168061
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.503
ELB improved by 0.169293
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.334
ELB improved by 0.169625
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.165
ELB improved by 0.16889
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.998
ELB improved by 0.166932
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.834
ELB improved by 0.163633
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.675
ELB improved by 0.158938
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.523
ELB improved by 0.152876
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.377
ELB improved by 0.145569
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.24
ELB improved by 0.137226
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.112
ELB improved by 0.12812
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.993
ELB improved by 0.118556
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.884
ELB improved by 0.108838
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.785
ELB improved by 0.0992391
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.695
ELB improved by 0.0899814
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.614
ELB improved by 0.0812253
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.541
ELB improved by 0.0730726
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.475
ELB improved by 0.065574
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.416
ELB improved by 0.0587409
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.364
ELB improved by 0.0525573
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.317
ELB improved by 0.0469903
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.275
ELB improved by 0.0419982
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.237
ELB improved by 0.0375357
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.204
ELB improved by 0.0335572
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.174
ELB improved by 0.0300185
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.147
ELB improved by 0.0268778
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.123
ELB improved by 0.0240957
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.101
ELB improved by 0.0216353
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.082
ELB improved by 0.0194623
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.064
ELB improved by 0.017545
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.048
ELB improved by 0.0158538
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.034
ELB improved by 0.0143619
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.021
ELB improved by 0.0130446
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.009
ELB improved by 0.01188
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.998
ELB improved by 0.0108482
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.988
ELB improved by 0.00993174
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-877.531
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-563.62
ELB improved by 313.911
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-505.906
ELB improved by 57.7149
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.395
ELB improved by 34.5109
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.182
ELB improved by 15.2124
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.342
ELB improved by 6.84007
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.966
ELB improved by 4.37636
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.246
ELB improved by 3.72033
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.544
ELB improved by 3.7013
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.675
ELB improved by 3.86924
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.77
ELB improved by 3.90467
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.218
ELB improved by 3.55235
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.418
ELB improved by 2.7999
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.478
ELB improved by 1.93964
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.21
ELB improved by 1.2682
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.356
ELB improved by 0.854126
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.732
ELB improved by 0.624332
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.233
ELB improved by 0.498456
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.806
ELB improved by 0.427775
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.418
ELB improved by 0.387568
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.052
ELB improved by 0.365675
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.696
ELB improved by 0.355887
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.342
ELB improved by 0.354797
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.981
ELB improved by 0.360413
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.61
ELB improved by 0.371559
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.222
ELB improved by 0.387625
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.814
ELB improved by 0.408467
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.379
ELB improved by 0.434384
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.913
ELB improved by 0.466119
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.408
ELB improved by 0.504798
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.857
ELB improved by 0.55161
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.25
ELB improved by 0.606879
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.581
ELB improved by 0.668434
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.851
ELB improved by 0.730611
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.064
ELB improved by 0.786276
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.234
ELB improved by 0.83057
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.372
ELB improved by 0.861788
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.491
ELB improved by 0.881066
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.595
ELB improved by 0.895901
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.67
ELB improved by 0.924983
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.685
ELB improved by 0.985603
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.643
ELB improved by 1.04115
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.646
ELB improved by 0.99702
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.834
ELB improved by 0.812025
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.269
ELB improved by 0.564949
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.908
ELB improved by 0.36182
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.677
ELB improved by 0.230375
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.525
ELB improved by 0.152325
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.419
ELB improved by 0.106052
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.341
ELB improved by 0.0775375
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.282
ELB improved by 0.0590838
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.236
ELB improved by 0.0465851
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.198
ELB improved by 0.0377855
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.166
ELB improved by 0.0313839
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.14
ELB improved by 0.0265928
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.117
ELB improved by 0.022916
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.097
ELB improved by 0.0200298
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.079
ELB improved by 0.0177175
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.063
ELB improved by 0.0158304
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.049
ELB improved by 0.0142644
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.036
ELB improved by 0.0129455
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.024
ELB improved by 0.01182
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.013
ELB improved by 0.0108484
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.003
ELB improved by 0.0100014
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.994
ELB improved by 0.00925646
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-856.339
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-559.307
ELB improved by 297.033
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-498.23
ELB improved by 61.0765
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.09
ELB improved by 33.1402
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.805
ELB improved by 12.2852
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.917
ELB improved by 5.88793
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.705
ELB improved by 4.2116
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.882
ELB improved by 3.82289
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.963
ELB improved by 3.91954
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.743
ELB improved by 4.21961
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.21
ELB improved by 4.53322
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.614
ELB improved by 4.59646
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.43
ELB improved by 4.18344
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.058
ELB improved by 3.37206
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.616
ELB improved by 2.44223
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.037
ELB improved by 1.57849
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.095
ELB improved by 0.942361
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.514
ELB improved by 0.580565
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.121
ELB improved by 0.393333
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.83
ELB improved by 0.291269
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.6
ELB improved by 0.229731
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.411
ELB improved by 0.189002
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.251
ELB improved by 0.160069
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.113
ELB improved by 0.138438
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.991
ELB improved by 0.121654
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.883
ELB improved by 0.108263
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.785
ELB improved by 0.0973542
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.697
ELB improved by 0.0883199
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.616
ELB improved by 0.0807413
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.542
ELB improved by 0.0743174
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.473
ELB improved by 0.0688253
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.409
ELB improved by 0.0640956
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.349
ELB improved by 0.0599967
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.293
ELB improved by 0.0564244
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.239
ELB improved by 0.0532951
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.189
ELB improved by 0.0505405
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.141
ELB improved by 0.0481044
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.095
ELB improved by 0.04594
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.051
ELB improved by 0.044008
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.008
ELB improved by 0.0422753
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.968
ELB improved by 0.0407135
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.928
ELB improved by 0.0392986
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.89
ELB improved by 0.0380096
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.854
ELB improved by 0.0368289
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.818
ELB improved by 0.0357408
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.783
ELB improved by 0.0347321
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.749
ELB improved by 0.0337913
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.716
ELB improved by 0.0329086
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.684
ELB improved by 0.0320756
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.653
ELB improved by 0.0312852
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.623
ELB improved by 0.0305314
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.593
ELB improved by 0.0298095
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.564
ELB improved by 0.0291156
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.535
ELB improved by 0.0284467
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.507
ELB improved by 0.0278007
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.48
ELB improved by 0.0271763
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.454
ELB improved by 0.0265727
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.428
ELB improved by 0.0259901
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.402
ELB improved by 0.0254288
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.377
ELB improved by 0.0248902
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.353
ELB improved by 0.0243758
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.329
ELB improved by 0.0238878
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.306
ELB improved by 0.0234289
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.283
ELB improved by 0.0230022
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.26
ELB improved by 0.0226115
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.238
ELB improved by 0.022261
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.216
ELB improved by 0.0219557
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.194
ELB improved by 0.0217016
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.173
ELB improved by 0.0215056
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.151
ELB improved by 0.0213758
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.13
ELB improved by 0.0213224
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.109
ELB improved by 0.0213574
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.087
ELB improved by 0.0214958
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.065
ELB improved by 0.0217561
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.043
ELB improved by 0.0221614
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.02
ELB improved by 0.0227403
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.997
ELB improved by 0.0235281
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.972
ELB improved by 0.0245677
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.946
ELB improved by 0.0259095
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.919
ELB improved by 0.0276097
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.889
ELB improved by 0.0297251
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.857
ELB improved by 0.032303
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.821
ELB improved by 0.0353638
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.783
ELB improved by 0.0388797
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.74
ELB improved by 0.0427553
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.693
ELB improved by 0.0468242
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.642
ELB improved by 0.0508754
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.587
ELB improved by 0.0547061
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.529
ELB improved by 0.0581769
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.468
ELB improved by 0.0612379
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.404
ELB improved by 0.0639135
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.338
ELB improved by 0.0662674
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.269
ELB improved by 0.0683699
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.199
ELB improved by 0.0702806
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.127
ELB improved by 0.0720422
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.053
ELB improved by 0.0736808
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.978
ELB improved by 0.0752092
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.902
ELB improved by 0.0766324
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.824
ELB improved by 0.0779575
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.744
ELB improved by 0.0792085
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.664
ELB improved by 0.080449
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.582
ELB improved by 0.0818111
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.499
ELB improved by 0.0835307
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.413
ELB improved by 0.0859705
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.323
ELB improved by 0.0895741
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.228
ELB improved by 0.0945959
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.128
ELB improved by 0.10036
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.024
ELB improved by 0.104188
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.922
ELB improved by 0.101721
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.831
ELB improved by 0.0907902
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.757
ELB improved by 0.0748185
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.697
ELB improved by 0.0593484
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.65
ELB improved by 0.0470265
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.612
ELB improved by 0.0376942
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.582
ELB improved by 0.0304825
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.557
ELB improved by 0.0247485
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.537
ELB improved by 0.0201216
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.521
ELB improved by 0.0163771
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.507
ELB improved by 0.0133555
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.496
ELB improved by 0.0109288
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.487
ELB improved by 0.00898903
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.040 0.167 2.198
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.039 | 0.027 | 0.068 | |
| getPIPs | 0.048 | 0.019 | 0.067 | |
| graper | 0.092 | 0.012 | 0.104 | |
| makeExampleData | 0.008 | 0.004 | 0.012 | |
| makeExampleDataWithUnequalGroups | 0.036 | 0.001 | 0.036 | |
| plotELBO | 0.224 | 0.012 | 0.236 | |
| plotGroupPenalties | 0.822 | 0.104 | 0.926 | |
| plotPosterior | 0.512 | 0.008 | 0.520 | |
| predict.graper | 2.075 | 0.068 | 2.143 | |
| print.graper | 0.056 | 0.008 | 0.064 | |