Multiple platform build/check report for BioC 3.17 - BUILD results for gcatest on nebbiolo1

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This page was generated on 2023-04-12 10:55:25 -0400 (Wed, 12 Apr 2023).

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 22.04.1 LTS)	x86_64	4.3.0 alpha (2023-04-03 r84154)	4547
nebbiolo2	Linux (Ubuntu 20.04.5 LTS)	x86_64	R Under development (unstable) (2023-02-14 r83833) -- "Unsuffered Consequences"	4333
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for gcatest on nebbiolo1

To the developers/maintainers of the gcatest package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/gcatest.git to reflect on this report. See Troubleshooting Build Report for more information.

- Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

~~gcatest 1.29.1~~ (landing page)
Wei Hao , John D. Storey

Snapshot Date: 2023-04-11 14:00:16 -0400 (Tue, 11 Apr 2023)

git_url: https://git.bioconductor.org/packages/gcatest

git_branch: devel

git_last_commit: 5706c98

git_last_commit_date: 2023-04-10 10:40:12 -0400 (Mon, 10 Apr 2023)

nebbiolo1

Linux (Ubuntu 22.04.1 LTS) / x86_64

ERROR

skipped

nebbiolo2

Linux (Ubuntu 20.04.5 LTS) / x86_64

ERROR

skipped

Summary

Package: gcatest

Version: 1.29.1

Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data gcatest

StartedAt: 2023-04-11 16:34:15 -0400 (Tue, 11 Apr 2023)

EndedAt: 2023-04-11 16:34:17 -0400 (Tue, 11 Apr 2023)

EllapsedTime: 1.3 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data gcatest
###
##############################################################################
##############################################################################


* checking for file ‘gcatest/DESCRIPTION’ ... OK
* preparing ‘gcatest’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
ERROR: dependency ‘lfa’ is not available for package ‘gcatest’
* removing ‘/tmp/Rtmp3UORVv/Rinst30881e2eaa4fe2/gcatest’
      -----------------------------------
ERROR: package installation failed