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This page was generated on 2023-04-12 10:55:35 -0400 (Wed, 12 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.1 LTS)x86_644.3.0 alpha (2023-04-03 r84154) 4547
nebbiolo2Linux (Ubuntu 20.04.5 LTS)x86_64R Under development (unstable) (2023-02-14 r83833) -- "Unsuffered Consequences" 4333
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BUILD results for consensusSeekeR on nebbiolo2


To the developers/maintainers of the consensusSeekeR package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/consensusSeekeR.git to reflect on this report. See Troubleshooting Build Report for more information.

- Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

Package 416/2207HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
consensusSeekeR 1.27.0  (landing page)
Astrid Deschenes
Snapshot Date: 2023-04-11 14:00:16 -0400 (Tue, 11 Apr 2023)
git_url: https://git.bioconductor.org/packages/consensusSeekeR
git_branch: devel
git_last_commit: 33153bc
git_last_commit_date: 2022-11-01 11:12:31 -0400 (Tue, 01 Nov 2022)
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    OK  
nebbiolo2Linux (Ubuntu 20.04.5 LTS) / x86_64  OK    OK    OK  

Summary

Package: consensusSeekeR
Version: 1.27.0
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data consensusSeekeR
StartedAt: 2023-04-12 02:32:46 -0400 (Wed, 12 Apr 2023)
EndedAt: 2023-04-12 02:34:15 -0400 (Wed, 12 Apr 2023)
EllapsedTime: 88.3 seconds
RetCode: 0
Status:   OK  
PackageFile: consensusSeekeR_1.27.0.tar.gz
PackageFileSize: 737.6 KiB

Command output

##############################################################################
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###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data consensusSeekeR
###
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* checking for file ‘consensusSeekeR/DESCRIPTION’ ... OK
* preparing ‘consensusSeekeR’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* looking to see if a ‘data/datalist’ file should be added
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in
  serialize/load version 3 cannot be read in older versions of R.
  File(s) containing such objects:
    ‘consensusSeekeR/data/A549_CTCF_MYJ_NarrowPeaks_partial.RData’
    ‘consensusSeekeR/data/A549_CTCF_MYJ_Peaks_partial.RData’
    ‘consensusSeekeR/data/A549_CTCF_MYN_NarrowPeaks_partial.RData’
    ‘consensusSeekeR/data/A549_CTCF_MYN_Peaks_partial.RData’
    ‘consensusSeekeR/data/A549_FOSL2_01_NarrowPeaks_partial.RData’
    ‘consensusSeekeR/data/A549_FOSL2_01_Peaks_partial.RData’
    ‘consensusSeekeR/data/A549_FOXA1_01_NarrowPeaks_partial.RData’
    ‘consensusSeekeR/data/A549_FOXA1_01_Peaks_partial.RData’
    ‘consensusSeekeR/data/A549_NR3C1_CFQ_NarrowPeaks_partial.RData’
    ‘consensusSeekeR/data/A549_NR3C1_CFQ_Peaks_partial.RData’
    ‘consensusSeekeR/data/A549_NR3C1_CFR_NarrowPeaks_partial.RData’
    ‘consensusSeekeR/data/A549_NR3C1_CFR_Peaks_partial.RData’
    ‘consensusSeekeR/data/A549_NR3C1_CFS_NarrowPeaks_partial.RData’
    ‘consensusSeekeR/data/A549_NR3C1_CFS_Peaks_partial.RData’
    ‘consensusSeekeR/data/NOrMAL_nucleosome_positions.RData’
    ‘consensusSeekeR/data/NOrMAL_nucleosome_ranges.RData’
    ‘consensusSeekeR/data/NucPosSimulator_nucleosome_positions.RData’
    ‘consensusSeekeR/data/NucPosSimulator_nucleosome_ranges.RData’
    ‘consensusSeekeR/data/PING_nucleosome_positions.RData’
    ‘consensusSeekeR/data/PING_nucleosome_ranges.RData’
* building ‘consensusSeekeR_1.27.0.tar.gz’