Back to Multiple platform build/check report for BioC 3.17 |
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This page was generated on 2023-04-12 10:55:22 -0400 (Wed, 12 Apr 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
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nebbiolo1 | Linux (Ubuntu 22.04.1 LTS) | x86_64 | 4.3.0 alpha (2023-04-03 r84154) | 4547 |
nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) | x86_64 | R Under development (unstable) (2023-02-14 r83833) -- "Unsuffered Consequences" | 4333 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the biomvRCNS package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/biomvRCNS.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details. |
Package 208/2207 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
biomvRCNS 1.39.0 (landing page) Yang Du
| nebbiolo1 | Linux (Ubuntu 22.04.1 LTS) / x86_64 | ERROR | ERROR | skipped | |||||||||
nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) / x86_64 | ERROR | ERROR | skipped | ||||||||||
Package: biomvRCNS |
Version: 1.39.0 |
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data biomvRCNS |
StartedAt: 2023-04-11 15:56:03 -0400 (Tue, 11 Apr 2023) |
EndedAt: 2023-04-11 15:56:05 -0400 (Tue, 11 Apr 2023) |
EllapsedTime: 1.4 seconds |
RetCode: 1 |
Status: ERROR |
PackageFile: None |
PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data biomvRCNS ### ############################################################################## ############################################################################## * checking for file ‘biomvRCNS/DESCRIPTION’ ... OK * preparing ‘biomvRCNS’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes ----------------------------------- * installing *source* package ‘biomvRCNS’ ... ** using staged installation ** libs using C compiler: ‘gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0’ gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c biomvRCNS.c -o biomvRCNS.o biomvRCNS.c: In function ‘forward’: biomvRCNS.c:153:43: error: ‘DOUBLE_XMIN’ undeclared (first use in this function); did you mean ‘DBL_MIN’? 153 | m_e(F, t, j, T)+= DOUBLE_XMIN; | ^~~~~~~~~~~ | DBL_MIN biomvRCNS.c:153:43: note: each undeclared identifier is reported only once for each function it appears in biomvRCNS.c: In function ‘viterbi’: biomvRCNS.c:294:36: error: ‘DOUBLE_XMAX’ undeclared (first use in this function); did you mean ‘DBL_MAX’? 294 | double obs, prod, maxprod=-DOUBLE_XMAX; | ^~~~~~~~~~~ | DBL_MAX biomvRCNS.c: In function ‘logviterbi’: biomvRCNS.c:401:36: error: ‘DOUBLE_XMAX’ undeclared (first use in this function); did you mean ‘DBL_MAX’? 401 | double obs, prod, maxprod=-DOUBLE_XMAX; | ^~~~~~~~~~~ | DBL_MAX make: *** [/home/biocbuild/bbs-3.17-bioc/R/etc/Makeconf:191: biomvRCNS.o] Error 1 ERROR: compilation failed for package ‘biomvRCNS’ * removing ‘/tmp/RtmpvSIfK3/Rinst11efca6f076f82/biomvRCNS’ ----------------------------------- ERROR: package installation failed